References

1

H. M. Berman, W. K. Olson, D. L. Beveridge, J. D. Westbrook, A. Gelben, T. Demeny, S. Hsieh, A. R. Srinivasan, and B. Schneider. Nucleic Acid Database: A comprehensive Relational Database of Three-Dimensional Structures of Nucleic Acids. Biophys. J., 63:751, 1992.

2

Helen M. Berman, Anke Gelbin, Lester Clowney, Shu-Hsin Hsieh, Christine Zardecki, and John Westbrook. The Nucleic Acid Database: Present and Future. J. Res. Natl. Inst. Stand. Tech., 101:243, 1996.

3

S. R. Hall, F. H. Allen, and I. D. Brown. A new standard archive file for crystallography. Acta Crystallogr., A47:655-685, 1991.

4

P. M. D. Fitzgerald, H. M. Berman, P. E. Bourne, and K. Watenpaugh. Macromolecular CIF Working Group. International Union of Crystallography, 1992.

5

P. Fitzgerald, H. M. Berman, P. Bourne, B. McMahon, K. Watenpaugh, and J. D. Westbrook. The Macromolecular Crystallographic Information File Dictionary. IUCr, http://ndbserver.rutgers.edu/mmcif, 1995.

6

Philip E. Bourne, Helen M. Berman, Brian McMahon, Keith D. Watenpaugh, John Westbrook, and Paula M. D. Fitzgerald. The Macromolecular Crystallographic Information File (mmCIF). Methods in Enzymology, 1995. submitted.

7

S. R. Hall. The STAR File: A new format for electronic data transfer and lsarchiving. J. Chem. Inf. Comput. Sci., 31:326-333, 1991.

8

P. M. D. Fitzgerald, H. M. Berman, P. E. Bourne, and K. Watenpaugh. The Macromolecular CIF Dictionary. ACA Annual Meeting, Albuquerque, New Mexico, 1993.

9

A. F. P. Cook. Dictionary definition language in star file format. Technical report, ORAC Report, 1991.

10

S. R. Hall and A. F. P. Cook. Star dictionary definition language: Initial specification. J. Chem. Inf. Comput. Sci., 35:819-825, 1995.

11

H. M. Berman and J. D. Westbrook. Now the Nucleic Acid Database Uses CIF. In P. E. Bourne, editor, Proceedings fo the First Macromolecular CIF Tools Workshop, page 65, Tarrytown, New York, 1993. National Science Foundation.

12

John D. Westbrook, Shu-Hsin Hsieh, and P. M. D. Fitzgerald. CIFLIB, An Application Program Interface to CIF Dictionaries and Data Files. J. Appl. Cryst., 1996. in press.

13

H. M. Berman and J. D. Westbrook. A Gentle Introduction to one Working Alternative DDL for Macromolecular Structure. In S. D. Wodak, editor, European Macromolecular Crystallographic Information (mmCIF) Workshop, Free University of Brussels, 1994. European Commission.

14

J. D. Westbrook and S. R. Hall. A dictionary description language for macromolecular structure. J. Chem. Inf. Comput. Sci., 1996. to be submitted.

15

Shu-Hsin Hsieh and John D. Westbrook. CIFPARSE: A function library for mmCIF data exchange. Rutgers University, 1996. (http://ndbserver.rutgers.edu/software/CIFPARSE/).