# Minimized with a chisquare of 0.147635. ################################################################################ # # File: C_deoxyriboseC3endo_O3H_O5P_anti_+sc # Date: 08-Dec-97 19:44:48 # # This file was created by software developed by the # Nucleic Acid Database Project # # H. M. Berman, W. K. Olson, D. L. Beveridge, J. D. Westbrook, A. Gelbin, # T. Demeny, S. H. Shieh, A. R. Srinivasan, and B. Schneider. (1992). # The Nucleic Acid Database: A Comprehensive Relational Database of # Three-Dimensional Structures of Nucleic Acids. Biophys J., 63, 751-759. # # Questions or comments should be directed to: # # # ndbadmin@ndbserver.rutgers.edu # ################################################################################ data_C_deoxyriboseC3endo_O3H_O5P_anti_+sc # _chem_comp.id C_deoxyriboseC3endo_O3H_O5P_anti_+sc _chem_comp.name '2'-deoxycytidine-5'-phosphate' _chem_comp.type 'DNA linking' _chem_comp.model_details ;Model constructed for 2'-deoxycytidine-5'-phosphate from subcomponents for base, sugar and phosphate. The sugar is deoxyribose in the C3'-endo conformation, and geometries for the gamma torsion angle (synclinal), the chi torsion angle (antiperiplanar), and the C3*-O3* and C5*-O5* bonds are inserted from other models. ; _chem_comp.parent . _chem_comp.formula 'H11 C9 N3 O7 P1 ' _chem_comp.formula_weight 304.20 _chem_comp.number_atoms_all 31 _chem_comp.number_atoms_nh 20 _chem_comp.ndb_formal_charge -2 # loop_ _ndb_composite.comp_id _ndb_composite.sub_comp_id _ndb_composite.sub_type _ndb_composite.details C_deoxyriboseC3endo_O3H_O5P_anti_+sc cyt base 'Model constructed for cytosine with an N1-glycosidic linkage.' C_deoxyriboseC3endo_O3H_O5P_anti_+sc deoxyribose_C3endo_O3H_O5P_+sc sugar ;Model constructed for 1'-amino-2'-deoxyribose in the C3'-endo conformation. the gamma torsion (synclinal), the corresponding O4*-C4*-C5*-O5* torsion, and the C3*-O3* and C5*-O5* bond geometries are inserted from other models. ; C_deoxyriboseC3endo_O3H_O5P_anti_+sc PO4 phosphate . # loop_ _chem_comp_link.link_id _chem_comp_link.type_comp_1 _chem_comp_link.type_comp_2 _chem_comp_link.ndb_comp_id_comp_1 _chem_comp_link.ndb_comp_id_comp_2 deoxyribose_pyrimidine sugar base deoxyribose_C3endo_O3H_O5P_+sc cyt ribose_O5_PO4 sugar phosphate deoxyribose_C3endo_O3H_O5P_+sc PO4 # loop_ _ndb_dbsearch.db _ndb_dbsearch.sample_size _ndb_dbsearch.id _ndb_dbsearch.dbversion _ndb_dbsearch.time _ndb_dbsearch.dbreleasedate _ndb_dbsearch.comp_id csd 47 cyt 512 ;Mon Dec 8 13:25:10 1997 ; 'Sep 15 19:34:11 BST 1996' C_deoxyriboseC3endo_O3H_O5P_anti_+sc csd 6 deoxyribose 512 ;Mon Dec 8 13:29:26 1997 ; 'Sep 15 19:34:11 BST 1996' C_deoxyriboseC3endo_O3H_O5P_anti_+sc csd 6 deoxyribose_C3endo_O3H 512 ;Mon Dec 8 13:42:52 1997 ; 'Sep 15 19:34:11 BST 1996' C_deoxyriboseC3endo_O3H_O5P_anti_+sc csd 11 deoxyribose_O5P 512 ;Mon Dec 8 13:52:27 1997 ; 'Sep 15 19:34:11 BST 1996' C_deoxyriboseC3endo_O3H_O5P_anti_+sc csd 94 all_ribose_gamma 512 ;Mon Dec 8 14:31:38 1997 ; 'Sep 15 19:34:11 BST 1996' C_deoxyriboseC3endo_O3H_O5P_anti_+sc ndb 15 PO4_1 . . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc csd 16 C3endo_pyrimidine_anti . . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc csd 3 deoxyribose_C3endo_pyrimidine 512 'Sat Aug 23 13:18:09 1997' 'Sep 15 19:34:11 BST 1996' C_deoxyriboseC3endo_O3H_O5P_anti_+sc ndb 15 phosphate_O5_1 . . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.substruct_code _chem_comp_atom.charge _chem_comp_atom.model_cartn_x _chem_comp_atom.model_cartn_y _chem_comp_atom.model_cartn_z C_deoxyriboseC3endo_O3H_O5P_anti_+sc N1 N base 0 -0.6349 0.6660 2.2475 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C2 C base 0 -0.5641 0.0020 1.0193 C_deoxyriboseC3endo_O3H_O5P_anti_+sc N3 N base 0 -1.4094 0.3595 0.0232 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C4 C base 0 -2.2787 1.3567 0.2089 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C5 C base 0 -2.3599 2.0570 1.4458 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C6 C base 0 -1.5300 1.6817 2.4269 C_deoxyriboseC3endo_O3H_O5P_anti_+sc O2 O base 0 0.2665 -0.9053 0.8782 C_deoxyriboseC3endo_O3H_O5P_anti_+sc N4 N base 0 -3.0848 1.6862 -0.8003 C_deoxyriboseC3endo_O3H_O5P_anti_+sc H4A H base 0 . . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc H4B H base 0 . . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc H5 H base 0 . . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc H6 H base 0 . . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc C1* C sugar 0 0.0680 0.0291 3.4028 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C2* C sugar 0 1.5795 0.1703 3.3359 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C3* C sugar 0 1.8469 1.3816 4.2128 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C4* C sugar 0 0.7698 1.2539 5.2788 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C5* C sugar 0 0.3361 2.5494 5.9264 C_deoxyriboseC3endo_O3H_O5P_anti_+sc O3* O sugar 0 3.1585 1.3834 4.7512 C_deoxyriboseC3endo_O3H_O5P_anti_+sc O4* O sugar 0 -0.3592 0.6577 4.5932 C_deoxyriboseC3endo_O3H_O5P_anti_+sc O5* O sugar 0 0.0082 3.5442 4.9416 C_deoxyriboseC3endo_O3H_O5P_anti_+sc HA1* H sugar 0 . . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc HA2* H sugar 0 . . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc HB2* H sugar 0 . . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc HA3* H sugar 0 . . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc HA4* H sugar 0 . . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc HA5* H sugar 0 . . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc HB5* H sugar 0 . . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc P P phosphate 0 0.9618 4.7983 4.7062 C_deoxyriboseC3endo_O3H_O5P_anti_+sc O1P O phosphate 0 1.4689 5.3132 6.0033 C_deoxyriboseC3endo_O3H_O5P_anti_+sc O2P O phosphate -1 0.3441 5.7457 3.7435 C_deoxyriboseC3endo_O3H_O5P_anti_+sc O O phosphate -1 2.1307 4.2170 3.9978 # loop_ _chem_comp_chir.comp_id _chem_comp_chir.id _chem_comp_chir.atom_id _chem_comp_chir.number_atoms_all _chem_comp_chir.number_atoms_nh _chem_comp_chir.volume_flag _chem_comp_chir.volume_three _chem_comp_chir.volume_three_esd _chem_comp_chir.ndb_plane_flag _chem_comp_chir.ndb_plane_three _chem_comp_chir.ndb_plane_three_esd C_deoxyriboseC3endo_O3H_O5P_anti_+sc 1 C1* 4 3 sign 2.49 0.03 sign 54.18 0.78 C_deoxyriboseC3endo_O3H_O5P_anti_+sc 2 C3* 4 3 sign -2.51 0.10 sign -51.72 2.87 C_deoxyriboseC3endo_O3H_O5P_anti_+sc 3 C4* 4 3 sign 2.50 0.04 sign 50.99 1.10 # loop_ _chem_comp_chir_atom.chir_id _chem_comp_chir_atom.enum _chem_comp_chir_atom.comp_id _chem_comp_chir_atom.atom_id 1 1 C_deoxyriboseC3endo_O3H_O5P_anti_+sc O4* 1 2 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C2* 1 3 C_deoxyriboseC3endo_O3H_O5P_anti_+sc N 2 1 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C2* 2 2 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C4* 2 3 C_deoxyriboseC3endo_O3H_O5P_anti_+sc O3* 3 1 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C3* 3 2 C_deoxyriboseC3endo_O3H_O5P_anti_+sc O4* 3 3 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C5* # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.value_dist _chem_comp_bond.value_dist_esd C_deoxyriboseC3endo_O3H_O5P_anti_+sc N1 C2 sing 1.3967 0.0096 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C2 N3 sing 1.3546 0.0099 C_deoxyriboseC3endo_O3H_O5P_anti_+sc N3 C4 doub 1.3367 0.0100 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C4 C5 sing 1.4243 0.0088 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C5 C6 doub 1.3389 0.0087 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C6 N1 sing 1.3653 0.0070 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C2 O2 doub 1.2383 0.0089 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C4 N4 sing 1.3328 0.0097 C_deoxyriboseC3endo_O3H_O5P_anti_+sc N4 H4A sing . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc N4 H4B sing . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc C5 H5 sing . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc C6 H6 sing . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc C1* C2* sing 1.5192 0.0069 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C2* C3* sing 1.5186 0.0110 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C3* C4* sing 1.5212 0.0081 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C4* O4* sing 1.4492 0.0060 C_deoxyriboseC3endo_O3H_O5P_anti_+sc O4* C1* sing 1.4123 0.0065 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C3* O3* sing 1.4178 0.0067 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C4* C5* sing 1.5120 0.0117 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C5* O5* sing 1.4379 0.0099 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C1* HA1* sing . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc C2* HA2* sing . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc C2* HB2* sing . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc C3* HA3* sing . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc C4* HA4* sing . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc C5* HA5* sing . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc C5* HB5* sing . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc P O1P doub 1.485 0.017 C_deoxyriboseC3endo_O3H_O5P_anti_+sc P O2P sing 1.485 0.017 C_deoxyriboseC3endo_O3H_O5P_anti_+sc P O sing 1.485 0.017 # loop_ _chem_link_bond.link_id _chem_link_bond.atom_id_1 _chem_link_bond.atom_id_2 _chem_link_bond.atom_1_comp_id _chem_link_bond.atom_2_comp_id _chem_link_bond.value_order _chem_link_bond.value_dist _chem_link_bond.value_dist_esd deoxyribose_pyrimidine C1* N1 1 2 sing 1.4947 0.0031 ribose_O5_PO4 P O5* 2 1 sing 1.593 0.010 # loop_ _chem_comp_angle.comp_id _chem_comp_angle.atom_id_1 _chem_comp_angle.atom_id_2 _chem_comp_angle.atom_id_3 _chem_comp_angle.value_angle _chem_comp_angle.value_angle_esd _chem_comp_angle.value_dist _chem_comp_angle.value_dist_esd C_deoxyriboseC3endo_O3H_O5P_anti_+sc C6 N1 C2 120.32 0.52 2.40 0.01 C_deoxyriboseC3endo_O3H_O5P_anti_+sc N1 C2 N3 119.12 0.65 2.37 0.01 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C2 N3 C4 120.02 0.46 2.33 0.02 C_deoxyriboseC3endo_O3H_O5P_anti_+sc N3 C4 C5 121.68 0.70 2.41 0.01 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C4 C5 C6 117.53 0.73 2.36 0.01 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C5 C6 N1 121.12 0.51 2.35 0.01 C_deoxyriboseC3endo_O3H_O5P_anti_+sc N1 C2 O2 118.93 0.71 2.27 0.01 C_deoxyriboseC3endo_O3H_O5P_anti_+sc N3 C2 O2 121.95 0.67 2.27 0.01 C_deoxyriboseC3endo_O3H_O5P_anti_+sc N3 C4 N4 118.21 0.92 2.29 0.01 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C5 C4 N4 120.11 0.73 2.39 0.01 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C1* C2* C3* 102.80 0.51 2.37 0.02 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C2* C3* C4* 102.26 0.57 2.37 0.01 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C3* C4* O4* 104.79 0.66 2.35 0.01 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C4* O4* C1* 110.21 0.61 2.35 0.01 C_deoxyriboseC3endo_O3H_O5P_anti_+sc O4* C1* C2* 107.01 0.63 2.36 0.01 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C2* C3* O3* 112.71 2.71 2.44 0.04 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C4* C3* O3* 112.97 1.78 2.45 0.03 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C5* C4* C3* 115.64 1.14 2.57 0.01 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C5* C4* O4* 109.36 0.32 2.42 0.01 C_deoxyriboseC3endo_O3H_O5P_anti_+sc O5* C5* C4* 111.28 1.54 2.42 0.02 C_deoxyriboseC3endo_O3H_O5P_anti_+sc O1P P O2P 119.6 1.5 . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc O1P P O 108.3 3.2 . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc O2P P O 107.3 3.2 . . # loop_ _chem_link_angle.link_id _chem_link_angle.atom_id_1 _chem_link_angle.atom_id_2 _chem_link_angle.atom_id_3 _chem_link_angle.atom_1_comp_id _chem_link_angle.atom_2_comp_id _chem_link_angle.atom_3_comp_id _chem_link_angle.value_angle _chem_link_angle.value_angle_esd _chem_link_angle.value_dist _chem_link_angle.value_dist_esd deoxyribose_pyrimidine N1 C1* O4* 2 1 1 107.96 1.21 2.3500 0.0200 deoxyribose_pyrimidine N1 C1* C2* 2 1 1 112.66 1.14 2.5100 0.0200 deoxyribose_pyrimidine C2 N1 C1* 2 2 1 117.52 0.61 2.4700 0.0200 deoxyribose_pyrimidine C6 N1 C1* 2 2 1 122.20 0.67 2.5000 0.0000 ribose_O5_PO4 P O5* C5* 2 1 1 120.9 1.6 . . ribose_O5_PO4 O1P P O5* 2 2 1 110.7 1.2 . . ribose_O5_PO4 O2P P O5* 2 2 1 110.7 1.2 . . ribose_O5_PO4 O P O5* 2 2 1 104.0 1.9 . . # loop_ _chem_comp_tor.comp_id _chem_comp_tor.id _chem_comp_tor.atom_id_1 _chem_comp_tor.atom_id_2 _chem_comp_tor.atom_id_3 _chem_comp_tor.atom_id_4 C_deoxyriboseC3endo_O3H_O5P_anti_+sc N1-C2-N3-C4 N1 C2 N3 C4 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C2-N3-C4-C5 C2 N3 C4 C5 C_deoxyriboseC3endo_O3H_O5P_anti_+sc N3-C4-C5-C6 N3 C4 C5 C6 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C4-C5-C6-N1 C4 C5 C6 N1 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C5-C6-N1-C2 C5 C6 N1 C2 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C6-N1-C2-N3 C6 N1 C2 N3 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C6-N1-C2-O2 C6 N1 C2 O2 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C4-N3-C2-O2 C4 N3 C2 O2 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C2-N3-C4-N4 C2 N3 C4 N4 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C6-C5-C4-N4 C6 C5 C4 N4 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C4*-O4*-C1*-C2* C4* O4* C1* C2* C_deoxyriboseC3endo_O3H_O5P_anti_+sc O4*-C1*-C2*-C3* O4* C1* C2* C3* C_deoxyriboseC3endo_O3H_O5P_anti_+sc C1*-C2*-C3*-C4* C1* C2* C3* C4* C_deoxyriboseC3endo_O3H_O5P_anti_+sc C2*-C3*-C4*-O4* C2* C3* C4* O4* C_deoxyriboseC3endo_O3H_O5P_anti_+sc C3*-C4*-O4*-C1* C3* C4* O4* C1* C_deoxyriboseC3endo_O3H_O5P_anti_+sc C2*-C3*-C4*-C5* C2* C3* C4* C5* C_deoxyriboseC3endo_O3H_O5P_anti_+sc C3*-C4*-C5*-O5* C3* C4* C5* O5* C_deoxyriboseC3endo_O3H_O5P_anti_+sc O3*-C3*-C4*-C5* O3* C3* C4* C5* C_deoxyriboseC3endo_O3H_O5P_anti_+sc O4*-C4*-C3*-O3* O4* C4* C3* O3* C_deoxyriboseC3endo_O3H_O5P_anti_+sc O4*-C4*-C5*-O5* O4* C4* C5* O5* C_deoxyriboseC3endo_O3H_O5P_anti_+sc C5*-C4*-O4*-C1* C5* C4* O4* C1* C_deoxyriboseC3endo_O3H_O5P_anti_+sc C1*-C2*-C3*-O3* C1* C2* C3* O3* # _chem_link_tor.link_id deoxyribose_pyrimidine _chem_link_tor.id chi_anti_C3endo_pyrimidine _chem_link_tor.atom_id_1 O4* _chem_link_tor.atom_id_2 C1* _chem_link_tor.atom_id_3 N1 _chem_link_tor.atom_id_4 C2 _chem_link_tor.atom_1_comp_id 1 _chem_link_tor.atom_2_comp_id 1 _chem_link_tor.atom_3_comp_id 2 _chem_link_tor.atom_4_comp_id 2 # loop_ _chem_comp_tor_value.comp_id _chem_comp_tor_value.tor_id _chem_comp_tor_value.angle _chem_comp_tor_value.angle_esd _chem_comp_tor_value.dist _chem_comp_tor_value.dist_esd C_deoxyriboseC3endo_O3H_O5P_anti_+sc N1-C2-N3-C4 1.13 3.09 2.70 0.01 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C2-N3-C4-C5 359.21 2.66 2.76 0.01 C_deoxyriboseC3endo_O3H_O5P_anti_+sc N3-C4-C5-C6 0.06 3.62 2.75 0.01 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C4-C5-C6-N1 0.28 2.05 2.70 0.01 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C5-C6-N1-C2 0.09 2.67 2.76 0.01 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C6-N1-C2-N3 359.20 4.32 2.75 0.01 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C6-N1-C2-O2 179.31 3.98 3.51 0.01 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C4-N3-C2-O2 181.02 2.75 3.47 0.01 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C2-N3-C4-N4 179.42 2.48 3.54 0.02 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C6-C5-C4-N4 179.86 3.56 3.58 0.01 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C4*-O4*-C1*-C2* 4.17 7.07 2.37 0.01 C_deoxyriboseC3endo_O3H_O5P_anti_+sc O4*-C1*-C2*-C3* 335.52 5.35 2.35 0.01 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C1*-C2*-C3*-C4* 34.16 2.49 2.35 0.01 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C2*-C3*-C4*-O4* 327.62 3.09 2.36 0.01 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C3*-C4*-O4*-C1* 18.00 6.18 2.37 0.02 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C2*-C3*-C4*-C5* 207.16 3.23 3.73 0.01 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C3*-C4*-C5*-O5* 52.19 4.95 2.93 0.07 C_deoxyriboseC3endo_O3H_O5P_anti_+sc O3*-C3*-C4*-C5* 85.70 4.91 3.28 0.06 C_deoxyriboseC3endo_O3H_O5P_anti_+sc O4*-C4*-C3*-O3* 206.16 5.02 3.59 0.02 C_deoxyriboseC3endo_O3H_O5P_anti_+sc O4*-C4*-C5*-O5* 293.22 4.75 2.91 0.07 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C5*-C4*-O4*-C1* 142.55 6.60 3.57 0.03 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C1*-C2*-C3*-O3* 155.80 4.77 3.63 0.02 # _chem_link_tor_value.link_id deoxyribose_pyrimidine _chem_link_tor_value.tor_id chi_anti_C3endo_pyrimidine _chem_link_tor_value.angle 193.3 _chem_link_tor_value.angle_esd 14.0 _chem_link_tor_value.dist . _chem_link_tor_value.dist_esd . # loop_ _ndb_chem_comp_bond.comp_id _ndb_chem_comp_bond.atom_id_1 _ndb_chem_comp_bond.atom_id_2 _ndb_chem_comp_bond.csd_bond_order _ndb_chem_comp_bond.dbsearch_id _ndb_chem_comp_bond.value_dist_calc _ndb_chem_comp_bond.value_dist _ndb_chem_comp_bond.value_dist_delta C_deoxyriboseC3endo_O3H_O5P_anti_+sc N1 C2 '1,2,5 ' cyt 1.3979 1.3967 -0.0012 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C2 N3 '1,2,5 ' cyt 1.3545 1.3546 0.0001 C_deoxyriboseC3endo_O3H_O5P_anti_+sc N3 C4 '1,2,5 ' cyt 1.3358 1.3367 0.0009 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C4 C5 '1,2,5 ' cyt 1.4237 1.4243 0.0006 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C5 C6 '1,2,5 ' cyt 1.3387 1.3389 0.0002 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C6 N1 '1,2,5 ' cyt 1.3657 1.3653 -0.0004 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C2 O2 '1,2,5 ' cyt 1.2382 1.2383 0.0001 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C4 N4 '1,2,5 ' cyt 1.3330 1.3328 -0.0002 C_deoxyriboseC3endo_O3H_O5P_anti_+sc N4 H4A 1 cyt . . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc N4 H4B 1 cyt . . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc C5 H5 1 cyt . . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc C6 H6 1 cyt . . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc C1* C2* 1 deoxyribose 1.5196 1.5192 -0.0004 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C2* C3* 1 deoxyribose 1.5191 1.5186 -0.0005 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C3* C4* 1 deoxyribose 1.5207 1.5212 0.0005 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C4* O4* 1 deoxyribose 1.4492 1.4492 0.0000 C_deoxyriboseC3endo_O3H_O5P_anti_+sc O4* C1* 1 deoxyribose 1.4123 1.4123 -0.0001 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C3* O3* '1 A' deoxyribose_C3endo_O3H 1.4178 1.4178 0.0000 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C4* C5* 1 deoxyribose 1.5119 1.5120 0.0001 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C5* O5* '1 A' deoxyribose_O5P 1.4377 1.4379 0.0002 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C1* HA1* 1 deoxyribose . . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc C2* HA2* 1 deoxyribose . . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc C2* HB2* 1 deoxyribose . . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc C3* HA3* 1 deoxyribose . . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc C4* HA4* 1 deoxyribose . . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc C5* HA5* 1 deoxyribose . . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc C5* HB5* 1 deoxyribose . . . C_deoxyriboseC3endo_O3H_O5P_anti_+sc P O1P 1 PO4_1 1.4849 1.4850 0.0001 C_deoxyriboseC3endo_O3H_O5P_anti_+sc P O2P 1 PO4_1 1.4852 1.4850 -0.0002 C_deoxyriboseC3endo_O3H_O5P_anti_+sc P O 1 PO4_1 1.4853 1.4850 -0.0003 # loop_ _ndb_chem_link_bond.link_id _ndb_chem_link_bond.dbsearch_id _ndb_chem_link_bond.atom_id_1 _ndb_chem_link_bond.atom_id_2 _ndb_chem_link_bond.atom_1_comp_id _ndb_chem_link_bond.atom_2_comp_id _ndb_chem_link_bond.value_dist_calc _ndb_chem_link_bond.value_dist _ndb_chem_link_bond.value_dist_delta deoxyribose_pyrimidine deoxyribose_C3endo_pyrimidine C1* N1 1 2 1.4948 1.4947 -0.0001 ribose_O5_PO4 phosphate_O5_1 P O5* 2 1 1.5929 1.5930 0.0001 # loop_ _ndb_chem_comp_angle.comp_id _ndb_chem_comp_angle.atom_id_1 _ndb_chem_comp_angle.atom_id_2 _ndb_chem_comp_angle.atom_id_3 _ndb_chem_comp_angle.dbsearch_id _ndb_chem_comp_angle.value_angle_calc _ndb_chem_comp_angle.value_angle _ndb_chem_comp_angle.value_angle_delta C_deoxyriboseC3endo_O3H_O5P_anti_+sc C6 N1 C2 cyt 120.12 120.32 0.20 C_deoxyriboseC3endo_O3H_O5P_anti_+sc N1 C2 N3 cyt 119.29 119.12 -0.17 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C2 N3 C4 cyt 120.06 120.02 -0.04 C_deoxyriboseC3endo_O3H_O5P_anti_+sc N3 C4 C5 cyt 121.68 121.68 0.00 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C4 C5 C6 cyt 117.61 117.53 -0.08 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C5 C6 N1 cyt 121.23 121.12 -0.11 C_deoxyriboseC3endo_O3H_O5P_anti_+sc N1 C2 O2 cyt 118.82 118.93 0.11 C_deoxyriboseC3endo_O3H_O5P_anti_+sc N3 C2 O2 cyt 121.89 121.95 0.06 C_deoxyriboseC3endo_O3H_O5P_anti_+sc N3 C4 N4 cyt 118.21 118.21 0.00 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C5 C4 N4 cyt 120.11 120.11 0.00 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C1* C2* C3* deoxyribose 102.93 102.80 -0.13 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C2* C3* C4* deoxyribose 102.30 102.26 -0.04 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C3* C4* O4* deoxyribose 104.76 104.79 0.03 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C4* O4* C1* deoxyribose 110.26 110.21 -0.05 C_deoxyriboseC3endo_O3H_O5P_anti_+sc O4* C1* C2* deoxyribose 107.25 107.01 -0.24 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C2* C3* O3* deoxyribose 112.52 112.71 0.19 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C4* C3* O3* deoxyribose 112.90 112.97 0.07 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C5* C4* C3* deoxyribose 115.56 115.64 0.08 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C5* C4* O4* deoxyribose 109.37 109.36 -0.01 C_deoxyriboseC3endo_O3H_O5P_anti_+sc O5* C5* C4* deoxyribose 111.40 111.28 -0.12 C_deoxyriboseC3endo_O3H_O5P_anti_+sc O1P P O2P PO4_1 119.15 119.60 0.45 C_deoxyriboseC3endo_O3H_O5P_anti_+sc O1P P O PO4_1 106.48 108.30 1.82 C_deoxyriboseC3endo_O3H_O5P_anti_+sc O2P P O PO4_1 105.53 107.30 1.77 # loop_ _ndb_chem_link_angle.link_id _ndb_chem_link_angle.dbsearch_id _ndb_chem_link_angle.atom_id_1 _ndb_chem_link_angle.atom_id_2 _ndb_chem_link_angle.atom_id_3 _ndb_chem_link_angle.atom_1_comp_id _ndb_chem_link_angle.atom_2_comp_id _ndb_chem_link_angle.atom_3_comp_id _ndb_chem_link_angle.value_angle_calc _ndb_chem_link_angle.value_angle _ndb_chem_link_angle.value_angle_delta deoxyribose_pyrimidine deoxyribose_C3endo_pyrimidine N1 C1* O4* 2 1 1 108.6391 107.9600 -0.6791 deoxyribose_pyrimidine deoxyribose_C3endo_pyrimidine N1 C1* C2* 2 1 1 113.2125 112.6600 -0.5525 deoxyribose_pyrimidine deoxyribose_C3endo_pyrimidine C2 N1 C1* 2 2 1 116.9273 117.5200 0.5927 deoxyribose_pyrimidine deoxyribose_C3endo_pyrimidine C6 N1 C1* 2 2 1 121.5706 122.2000 0.6294 ribose_O5_PO4 phosphate_O5_1 P O5* C5* 1 1 2 120.6297 120.9000 0.2703 ribose_O5_PO4 phosphate_O5_1 O5* P O1P 2 2 1 110.3872 110.7000 0.3128 ribose_O5_PO4 phosphate_O5_1 O5* P O2P 2 2 1 110.4292 110.7000 0.2708 ribose_O5_PO4 phosphate_O5_1 O P O5* 2 2 1 103.4998 104.0000 0.5002 # loop_ _ndb_chem_comp_tor.comp_id _ndb_chem_comp_tor.id _ndb_chem_comp_tor.dbsearch_id _ndb_chem_comp_tor.value_angle_calc _ndb_chem_comp_tor.value_angle _ndb_chem_comp_tor.value_angle_delta C_deoxyriboseC3endo_O3H_O5P_anti_+sc N1-C2-N3-C4 cyt 1.48 1.13 -0.35 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C2-N3-C4-C5 cyt 359.16 359.21 0.05 C_deoxyriboseC3endo_O3H_O5P_anti_+sc N3-C4-C5-C6 cyt 0.00 0.06 0.06 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C4-C5-C6-N1 cyt 0.17 0.28 0.11 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C5-C6-N1-C2 cyt 0.49 0.09 -0.40 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C6-N1-C2-N3 cyt 358.68 359.20 0.52 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C6-N1-C2-O2 cyt 179.20 179.31 0.11 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C4-N3-C2-O2 cyt 180.95 181.02 0.07 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C2-N3-C4-N4 cyt 179.38 179.42 0.04 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C6-C5-C4-N4 cyt 179.78 179.86 0.08 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C4*-O4*-C1*-C2* deoxyribose 2.59 4.17 1.58 C_deoxyriboseC3endo_O3H_O5P_anti_+sc O4*-C1*-C2*-C3* deoxyribose 336.65 335.52 -1.13 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C1*-C2*-C3*-C4* deoxyribose 33.85 34.16 0.31 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C2*-C3*-C4*-O4* deoxyribose 327.01 327.62 0.61 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C3*-C4*-O4*-C1* deoxyribose 19.37 18.00 -1.37 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C2*-C3*-C4*-C5* deoxyribose 206.60 207.16 0.56 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C3*-C4*-C5*-O5* all_ribose_gamma 50.51 52.19 1.68 C_deoxyriboseC3endo_O3H_O5P_anti_+sc O3*-C3*-C4*-C5* deoxyribose 85.43 85.70 0.27 C_deoxyriboseC3endo_O3H_O5P_anti_+sc O4*-C4*-C3*-O3* deoxyribose 205.84 206.16 0.32 C_deoxyriboseC3endo_O3H_O5P_anti_+sc O4*-C4*-C5*-O5* all_ribose_gamma 292.64 293.22 0.58 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C5*-C4*-O4*-C1* deoxyribose 143.82 142.55 -1.27 C_deoxyriboseC3endo_O3H_O5P_anti_+sc C1*-C2*-C3*-O3* deoxyribose 155.29 155.80 0.51 # _ndb_chem_link_tor.link_id deoxyribose_pyrimidine _ndb_chem_link_tor.id chi_anti_C3endo_pyrimidine _ndb_chem_link_tor.dbsearch_id C3endo_pyrimidine_anti _ndb_chem_link_tor.value_angle_calc 193.21 _ndb_chem_link_tor.value_angle 193.30 _ndb_chem_link_tor.value_angle_delta 0.09 # loop_ _ndb_dbitem.id _ndb_dbitem.dbsearch_id _ndb_dbitem.molecule_id _ndb_dbitem.r_factor _ndb_dbitem.sigma _ndb_dbitem.compound _ndb_dbitem.citation acytid cyt 1 3.30 0.001-0.005A 'ALPHA-CYTIDINE (FOR STEREOISOMER SEE CYTIDI10)' 'M.L.POST,G.I.BIRNBAUM,C.P.HUBER,D.SHUGAR 1977, BIOCHIM.BIOPHYS.ACTA, 479, 133' bagxiq01 cyt 1 5.90 0.006-0.010A '3',5'-O-(1,1,3,3-TETRAISOPROPYLDISILOX-1,3-DIYL)-CYTIDINE' 'M.J.ROBINS,J.S.WILSON,L.SAWYER,M.N.G.JAMES 1983, CAN.J.CHEM., 61, 1911' bivvil cyt 1 2.80 0.006-0.010A ;2',3'-O-(TETRAISOPROPYL-1,3-DISILOXANEDIYL)-CYTIDINE (AT 97 DEG.K) ; 'J.D.HOOGENDORP,C.ROMERS 1982, ACTA CRYSTALLOGR.,SECT.B, 38, 2738' bivvil cyt 2 2.80 0.006-0.010A ;2',3'-O-(TETRAISOPROPYL-1,3-DISILOXANEDIYL)-CYTIDINE (AT 97 DEG.K) ; 'J.D.HOOGENDORP,C.ROMERS 1982, ACTA CRYSTALLOGR.,SECT.B, 38, 2738' bofwoi cyt 1 3.50 0.001-0.005A ;2'-DEOXY-2'-FLUOROCYTIDINE DIHYDRATE ; 'C.MARCK,B.LESYNG,W.SAENGER 1982, J.MOL.STRUCT., 82, 77' bomtay cyt 1 5.10 0.001-0.005A 1-VINYLCYTOSINE 'D.PFEIFFER,L.KUTSCHABSKY,S.HOFFMANN 1982, CRYST.STRUCT.COMMUN., 11, 1635' bosgof cyt 1 4.00 0.001-0.005A '1-(2-BETA-D-PSICOFURANOSYL)-CYTOSINE DIHYDRATE' ;G.V.GURSKAYA,G.M.JAVADOVA,S.G.ZAVGORODNY,T.L.TSILEVICH,B.P.GOTTIKH 1982, CRYST.STRUCT.COMMUN., 11, 1259 ; botsim cyt 1 3.90 0.001-0.005A ;1-(6-DEOXY-BETA-D-ALLOFURANOSYL)-CYTOSINE 5'-C-METHYLCYTIDINE ; ;G.V.GURSKAYA,A.S.ZHDANOV,S.N.MIKHAILOV,E.N.TSAPKINA 1982, CRYST.STRUCT.COMMUN., 11, 1245 ; botsim10 cyt 1 3.90 0.001-0.005A 1-(6-DESOXY-BETA-D-ALLOFURANOSYL)CYTOSINE ;G.M.DZHAVADOVA,G.V.GURSKAYA,E.SH.-B.GORELIK,S.N.MIKHAILOV 1988, KRISTALLOGRAFIYA, 33, 1408 ; boxgie cyt 1 4.50 0.006-0.010A ;DISODIUM DEOXYCYTIDINE-5'-PHOSPHATE HEPTAHYDRATE ; ;J.PANDIT,T.P.SESHADRI,M.A.VISWAMITRA 1983, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 39, 342 ; budway10 cyt 1 4.40 0.001-0.005A '9-(2-CARBOXYETHYL)-GUANINE 1-METHYLCYTOSINE' 'S.FUJITA,A.TAKENAKA,Y.SASADA 1984, BULL.CHEM.SOC.JPN., 57, 1707' cimjen cyt 1 5.90 0.001-0.005A 3-(1-CYTOSINYL)PROPIONAMIDE ;S.FUJITA,A.TAKENAKA,Y.SASADA 1984, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 40, 1467 ; cupyuh cyt 1 3.40 0.001-0.005A 'CYTIDINE-5'-O-DIMETHYLPHOSPHATE' 'R.G.BRENNAN,N.S.KONDO,M.SUNDARALINGAM 1984, NUCLEIC ACIDS RES., 12, 6813' cytcyp20 cyt 1 4.67 0.006-0.010A ;SODIUM BETA-CYTIDINE 2',3'-CYCLIC PHOSPHATE DIHYDRATE (OPTHALMOLOGIC AGENT) ; 'C.L.COULTER 1973, J.AM.CHEM.SOC., 95, 570' cytcyp20 cyt 2 4.67 0.006-0.010A ;SODIUM BETA-CYTIDINE 2',3'-CYCLIC PHOSPHATE DIHYDRATE (OPTHALMOLOGIC AGENT) ; 'C.L.COULTER 1973, J.AM.CHEM.SOC., 95, 570' cytidi01 cyt 1 2.87 0.001-0.005A '4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE BETA-CYTIDINE' 'D.L.WARD 1993, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 49, 1789' cytidi02 cyt 1 5.40 0.001-0.005A 'BETA-CYTIDINE (AT 123 DEG.K, HIGH RESOLUTION REFINEMENT.)' 'LIRONG CHEN,B.M.CRAVEN 1995, ACTA CRYSTALLOGR.,SECT.B (STR.SCI.), 51, 1081' decyuf cyt 1 4.90 0.001-0.005A 1-(2-HYDROXYETHYL)-CYTOSINE ;M.SHIBATA,A.TAKENAKA,Y.SASADA,M.OHKI 1985, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 41, 1354 ; dxcytd01 cyt 1 3.78 0.006-0.010A ;2'-DEOXYCYTIDINE (MONOCLINIC BETA FORM.) ; 'K.SURMA,M.ALEJSKA,M.GAWRON 1994, POL.J.CHEM., 68, 2553' dxcytd01 cyt 2 3.78 0.006-0.010A ;2'-DEOXYCYTIDINE (MONOCLINIC BETA FORM.) ; 'K.SURMA,M.ALEJSKA,M.GAWRON 1994, POL.J.CHEM., 68, 2553' dxcytd01 cyt 3 3.78 0.006-0.010A ;2'-DEOXYCYTIDINE (MONOCLINIC BETA FORM.) ; 'K.SURMA,M.ALEJSKA,M.GAWRON 1994, POL.J.CHEM., 68, 2553' fikhow cyt 1 4.10 0.001-0.005A ;2',5'-ANHYDROARABINOSYLCYTOSINE HEMIHYDRATE (INHIBITORY ACTIVITY AGAINST GROWTH OF L1210 CELLS) ; 'G.I.BIRNBAUM,M.BUDESINSKY,J.BERANEK 1987, CAN.J.CHEM., 65, 271' fikhow cyt 2 4.10 0.001-0.005A ;2',5'-ANHYDROARABINOSYLCYTOSINE HEMIHYDRATE (INHIBITORY ACTIVITY AGAINST GROWTH OF L1210 CELLS) ; 'G.I.BIRNBAUM,M.BUDESINSKY,J.BERANEK 1987, CAN.J.CHEM., 65, 271' fovxet cyt 1 5.60 0.006-0.010A ;5'-AZIDO-5'-DEOXY-1-BETA-D-ARABINOFURANOSYL-CYTOSINE SESQUIHYDRATE (ANTIVIRAL ACTIVITY) ; ;G.BISWAS,A.BANERJEE,W.SAENGER 1987, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 43, 1731 ; gahhom cyt 1 5.00 0.001-0.005A ;2',3'-DIDEOXYCYTIDINE (AGENT OF POTENTIAL USE IN AIDS THERAPY) ; ;J.V.SILVERTON,F.R.QUINN,R.D.HAUGWITZ,L.J.TODARO 1988, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 44, 321 ; gahhom01 cyt 1 3.70 0.001-0.005A ;2',3'-DIDEOXYCYTIDINE (AGENT OF POTENTIAL USE IN AIDS THERAPY) ; 'G.I.BIRNBAUM,TAI-SHUN LIN,W.H.PRUSOFF 1988, BIOCHEM.BIOPHYS.RES.COMM., 151, 608' gigmoy cyt 1 3.20 0.001-0.005A ;5'-CHLORO-5'-DEOXYARABINOFURANOSYL-CYTOSINE (ACTIVITY AS INHIBITOR OF NUCLEIC ACID SYNTHESIS) ; 'G.I.BIRNBAUM,M.BUDESINSKY,J.BERANEK 1988, CAN.J.CHEM., 66, 1203' gouger10 cyt 1 4.80 0.006-0.010A ;4-AMINO-1-(4-AMINO-2-OXO-1(2H)-PYRIMIDINYL)-1,4-DIDEOXY-BETA-D-GLUCOPYRANURONIC ACID MONOHYDRATE ; ;P.SWAMINATHAN,J.MCALISTER,M.SUNDARALINGAM 1980, ACTA CRYSTALLOGR.,SECT.B, 36, 878 ; gouger10 cyt 2 4.80 0.006-0.010A ;4-AMINO-1-(4-AMINO-2-OXO-1(2H)-PYRIMIDINYL)-1,4-DIDEOXY-BETA-D-GLUCOPYRANURONIC ACID MONOHYDRATE ; ;P.SWAMINATHAN,J.MCALISTER,M.SUNDARALINGAM 1980, ACTA CRYSTALLOGR.,SECT.B, 36, 878 ; jikhoa cyt 1 3.30 0.006-0.010A ;2',3'-DIDEOXY-3'-FLUOROCYTIDINE 1-(2,3-DIDEOXY-3-FLUORO-BETA-D-ERYTHRO-PENTOFURANOSYL)CYTOSINE ; ;H.L.DE WINTER,N.M.BLATON,O.M.PEETERS,C.J.DE RANTER,A.VAN AERSCHOT,P.HERDEWIJN 1991, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 47, 832 ; jikhoa cyt 2 3.30 0.006-0.010A ;2',3'-DIDEOXY-3'-FLUOROCYTIDINE 1-(2,3-DIDEOXY-3-FLUORO-BETA-D-ERYTHRO-PENTOFURANOSYL)CYTOSINE ; ;H.L.DE WINTER,N.M.BLATON,O.M.PEETERS,C.J.DE RANTER,A.VAN AERSCHOT,P.HERDEWIJN 1991, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 47, 832 ; juhlaz cyt 1 4.20 0.001-0.005A ;2'-DEOXY-2'-METHYLIDENECYTIDINE DIHYDRATE (POTENT INHIBITORY AGENT OF THE GROWTH OF TUMOUR CELLS) ; ;Y.YAMAGATA,K.TOMITA,N.MARUBAYASHI,I.UEDA,S.SAKATA,A.MATSUDA,K.TAKENUKI,T.UEDA 1992, NUCLEOSIDES AND NUCLEOTIDES, 11, 835 ; kosnov cyt 1 4.40 0.001-0.005A 1-(2,3-DIDEOXY-ERYTHRO-BETA-D-HEXOPYRANOSYL)CYTOSINE ;H.L.DE WINTER,C.J.DE RANTER,N.M.BLATON,O.M.PEETERS,A.VAN AERSCHOT,P.HERDEWIJN 1992, ACTA CRYSTALLOGR.,SECT.B (STR.SCI.), 48, 95 ; marafc cyt 1 3.80 0.001-0.005A '3'-O-METHYL-1-BETA-D-ARABINOFURANOSYLCYTOSINE' 'G.I.BIRNBAUM,E.DARZYNKIEWICZ,D.SHUGAR 1975, J.AM.CHEM.SOC., 97, 5904' metcyt01 cyt 1 4.50 0.001-0.005A 1-METHYLCYTOSINE 'M.ROSSI,T.J.KISTENMACHER 1977, ACTA CRYSTALLOGR.,SECT.B, 33, 3962' nagliq cyt 1 2.79 0.001-0.005A 'N-1--((2'-DEOXY-BETA-D-RIBO-PENTOFURANOSYL)METHYL)CYTOSINE' ;N.HOSSAIN,N.BLATON,O.PEETERS,J.ROZENSKI,P.A.HERDEWIJN 1996, TETRAHEDRON, 52, 5563 ; segmas cyt 1 3.20 0.001-0.005A 1-(6-DESOXY-ALPHA-D-TALOFURANOSYL)CYTOSINE ;G.M.DZHAVADOVA,G.V.GURSKAYA,E.SH.-B.GORELIK,S.N.MIKHAILOV 1988, KRISTALLOGRAFIYA, 33, 1408 ; sivzus cyt 1 3.20 0.001-0.005A ;1-(3-DEOXY-BETA-D-THREO-PENTOFURANOSYL)CYTOSINE HEMIHYDRATE (ANTICANCER ACTIVITY) 1-(3-DEOXY-BETA-D-ARABINOSYL)CYTOSINE HEMIHYDRATE ; ;TAI-SHUN LIN,JING-HUA YANG,MAO-CHIN LIU,ZHI-YI SHEN,YUNG-CHI CHENG,W.H.PRUSOFF,G.I.BIRNBAUM,J.GIZIEWICZ,I.GHAZZOULI,V.BRANKOVAN,JUE-SUN FENG,GUEH-DJEN HSIUNG 1991, J.MED.CHEM., 34, 693 ; sivzus cyt 2 3.20 0.001-0.005A ;1-(3-DEOXY-BETA-D-THREO-PENTOFURANOSYL)CYTOSINE HEMIHYDRATE (ANTICANCER ACTIVITY) 1-(3-DEOXY-BETA-D-ARABINOSYL)CYTOSINE HEMIHYDRATE ; ;TAI-SHUN LIN,JING-HUA YANG,MAO-CHIN LIU,ZHI-YI SHEN,YUNG-CHI CHENG,W.H.PRUSOFF,G.I.BIRNBAUM,J.GIZIEWICZ,I.GHAZZOULI,V.BRANKOVAN,JUE-SUN FENG,GUEH-DJEN HSIUNG 1991, J.MED.CHEM., 34, 693 ; waxluc cyt 1 5.00 0.001-0.005A '2',3'-DIDEHYDRO-2',3'-DIDEOXYCYTIDINE' 'P.VAN ROEY,E.W.TAYLOR,C.K.CHU,R.F.SCHINAZI 1993, J.AM.CHEM.SOC., 115, 5365' waxluc cyt 2 5.00 0.001-0.005A '2',3'-DIDEHYDRO-2',3'-DIDEOXYCYTIDINE' 'P.VAN ROEY,E.W.TAYLOR,C.K.CHU,R.F.SCHINAZI 1993, J.AM.CHEM.SOC., 115, 5365' wipwib cyt 1 3.14 0.001-0.005A '(2',3'-DIDEOXY-BETA-D-GLYCERO-PENT-2'-ENOPYRANOSYL)CYTOSINE' 'B.DOBOSZEWSKI,N.BLATON,P.HERDEWIJN 1995, J.ORG.CHEM., 60, 7909' wipwib cyt 2 3.14 0.001-0.005A '(2',3'-DIDEOXY-BETA-D-GLYCERO-PENT-2'-ENOPYRANOSYL)CYTOSINE' 'B.DOBOSZEWSKI,N.BLATON,P.HERDEWIJN 1995, J.ORG.CHEM., 60, 7909' wisgek cyt 1 2.90 0.001-0.005A ;2'-DEOXYCYTIDINE-N3-CYANOBORANE (P212121 FORM) ; ;QI GAO,A.SOOD,B.R.SHAW,L.D.WILLIAMS 1996, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 52, 1823 ; xyfcyt10 cyt 1 3.30 0.001-0.005A 1-ALPHA-D-XYLOFURANOSYL-CYTOSINE 'M.L.POST,C.P.HUBER,G.I.BIRNBAUM,D.SHUGAR 1981, CAN.J.CHEM., 59, 238' yukliz cyt 1 2.80 0.001-0.005A S-(+)-CYTALLENE ;B.C.N.M.JONES,J.V.SILVERTON,C.SIMONS,S.MEGATI,H.NISHIMURA,Y.MAEDA,H.MITSUYA,J.ZEMLICKA 1995, J.MED.CHEM., 38, 1397 ; zozvuf cyt 1 4.56 0.001-0.005A ;(4-AMINO-1-(2-DEOXY-BETA-D-RIBOFURANOSYL)-2-OXO-1H-3-PYRIMIDINIO)(CYANO)BORATE MONOHYDRATE (IN VIVO ANTINEOPLASTIC ACTIVITY AGAINST VARIOUS TUMORS, WITH POTENTIAL USE IN BORON NEUTRON-CAPTURE THERAPY FOR BRAIN CANCER) 2'-DEOXYCYTIDINE-N(3)-CYANOBORANE MONOHYDRATE ; ;P.SINGH,M.ZOTTOLA,SAQING HUANG,B.R.SHAW,L.G.PEDERSEN 1996, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 52, 693 ; cezbis deoxyribose 1 3.50 0.001-0.005A '2'-DEOXYADENOSINE' 'T.SATO 1984, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 40, 880' docytc deoxyribose 1 3.50 0.001-0.005A ;2'-DEOXYCYTIDINE HYDROCHLORIDE (ABSOLUTE CONFIGURATION) ; 'E.SUBRAMANIAN,D.J.HUNT 1970, ACTA CRYSTALLOGR.,SECT.B, 26, 303' gidtiw deoxyribose 1 4.20 0.006-0.010A 'N-4--(UREIDOCARBONYL)-2'DEOXYCYTIDINE' 'S.KUMAR,N.J.LEONARD 1988, J.ORG.CHEM., 53, 3959' hevxov deoxyribose 1 3.00 0.001-0.005A '5-HYDROXYMETHYL-2'-DEOXYCYTIDINE' ;JUN LI,S.V.P.KUMAR,A.L.STUART,L.T.J.DELBAERE,S.V.GUPTA 1994, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 50, 1837 ; jappev deoxyribose 1 4.90 0.006-0.010A ;5-METHYL-2'-DEOXYCYTIDINE 5'-MONOPHOSPHATE DIHYDRATE (ABSOLUTE CONFIGURATION) ; ;H.N.LALITHA,S.RAMAKUMAR,M.A.VISWAMITRA 1989, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 45, 1652 ; zozvuf deoxyribose 1 4.56 0.001-0.005A ;(4-AMINO-1-(2-DEOXY-BETA-D-RIBOFURANOSYL)-2-OXO-1H-3-PYRIMIDINIO)(CYANO)BORATE MONOHYDRATE (IN VIVO ANTINEOPLASTIC ACTIVITY AGAINST VARIOUS TUMORS, WITH POTENTIAL USE IN BORON NEUTRON-CAPTURE THERAPY FOR BRAIN CANCER) 2'-DEOXYCYTIDINE-N(3)-CYANOBORANE MONOHYDRATE ; ;P.SINGH,M.ZOTTOLA,SAQING HUANG,B.R.SHAW,L.G.PEDERSEN 1996, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 52, 693 ; cezbis deoxyribose_C3endo_O3H 1 3.50 0.001-0.005A '2'-DEOXYADENOSINE' 'T.SATO 1984, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 40, 880' docytc deoxyribose_C3endo_O3H 1 3.50 0.001-0.005A ;2'-DEOXYCYTIDINE HYDROCHLORIDE (ABSOLUTE CONFIGURATION) ; 'E.SUBRAMANIAN,D.J.HUNT 1970, ACTA CRYSTALLOGR.,SECT.B, 26, 303' gidtiw deoxyribose_C3endo_O3H 1 4.20 0.006-0.010A 'N-4--(UREIDOCARBONYL)-2'DEOXYCYTIDINE' 'S.KUMAR,N.J.LEONARD 1988, J.ORG.CHEM., 53, 3959' hevxov deoxyribose_C3endo_O3H 1 3.00 0.001-0.005A '5-HYDROXYMETHYL-2'-DEOXYCYTIDINE' ;JUN LI,S.V.P.KUMAR,A.L.STUART,L.T.J.DELBAERE,S.V.GUPTA 1994, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 50, 1837 ; jappev deoxyribose_C3endo_O3H 1 4.90 0.006-0.010A ;5-METHYL-2'-DEOXYCYTIDINE 5'-MONOPHOSPHATE DIHYDRATE (ABSOLUTE CONFIGURATION) ; ;H.N.LALITHA,S.RAMAKUMAR,M.A.VISWAMITRA 1989, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 45, 1652 ; zozvuf deoxyribose_C3endo_O3H 1 4.56 0.001-0.005A ;(4-AMINO-1-(2-DEOXY-BETA-D-RIBOFURANOSYL)-2-OXO-1H-3-PYRIMIDINIO)(CYANO)BORATE MONOHYDRATE (IN VIVO ANTINEOPLASTIC ACTIVITY AGAINST VARIOUS TUMORS, WITH POTENTIAL USE IN BORON NEUTRON-CAPTURE THERAPY FOR BRAIN CANCER) 2'-DEOXYCYTIDINE-N(3)-CYANOBORANE MONOHYDRATE ; ;P.SINGH,M.ZOTTOLA,SAQING HUANG,B.R.SHAW,L.G.PEDERSEN 1996, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 52, 693 ; boxgie deoxyribose_O5P 1 4.50 0.006-0.010A ;DISODIUM DEOXYCYTIDINE-5'-PHOSPHATE HEPTAHYDRATE ; ;J.PANDIT,T.P.SESHADRI,M.A.VISWAMITRA 1983, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 39, 342 ; dinyii10 deoxyribose_O5P 1 4.10 0.006-0.010A ;SODIUM BIS(DEOXYCYTIDYLYL-(3'-5')-DEOXYGUANOSINE) DINUCLEOTIDE HEPTAHYDRATE ; 'M.COLL,X.SOLANS,M.FONT-ALTABA,J.A.SUBIRANA 1987, J.BIOMOL.STRUCT.DYN., 4, 797' dinyii10 deoxyribose_O5P 2 4.10 0.006-0.010A ;SODIUM BIS(DEOXYCYTIDYLYL-(3'-5')-DEOXYGUANOSINE) DINUCLEOTIDE HEPTAHYDRATE ; 'M.COLL,X.SOLANS,M.FONT-ALTABA,J.A.SUBIRANA 1987, J.BIOMOL.STRUCT.DYN., 4, 797' fikhai deoxyribose_O5P 1 5.40 0.001-0.005A '2'-DEOXY-3',5'-DI-O-ACETYL-ADENOSINE' 'L.H.KOOLE,H.M.BUCK,J.A.KANTERS,A.SCHOUTEN 1987, CAN.J.CHEM., 65, 326' fikhai01 deoxyribose_O5P 1 4.80 0.006-0.010A '3',5'-DI-O-ACETYL-2'-DEOXYADENOSINE' 'J.N.LOW,R.A.HOWIE 1988, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 44, 2202' gebtem deoxyribose_O5P 1 3.30 0.001-0.005A '5'-ACETYLTHYMIDINE' 'T.SATO 1988, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 44, 691' jafhih deoxyribose_O5P 1 3.10 0.001-0.005A ;2'-DEOXY-3',5'-DI-O-ACETYL GUANOSINE ; 'L.H.KOOLE,H.M.BUCK,J.A.KANTERS,A.SCHOUTEN 1988, CAN.J.CHEM., 66, 2634' jafhih deoxyribose_O5P 2 3.10 0.001-0.005A ;2'-DEOXY-3',5'-DI-O-ACETYL GUANOSINE ; 'L.H.KOOLE,H.M.BUCK,J.A.KANTERS,A.SCHOUTEN 1988, CAN.J.CHEM., 66, 2634' yevjak deoxyribose_O5P 1 6.70 0.006-0.010A '3',5'-DI-O-ACETYL-3-NITROTHYMIDINE' ;X.ARIZA,V.BOU,J.VILARRASA,V.TERESHKO,J.L.CAMPOS 1994, ANGEW.CHEM.,INT.ED.ENGL., 33, 2454 ; yevjak deoxyribose_O5P 2 6.70 0.006-0.010A '3',5'-DI-O-ACETYL-3-NITROTHYMIDINE' ;X.ARIZA,V.BOU,J.VILARRASA,V.TERESHKO,J.L.CAMPOS 1994, ANGEW.CHEM.,INT.ED.ENGL., 33, 2454 ; jappev deoxyribose_O5P 1 4.90 0.006-0.010A ;5-METHYL-2'-DEOXYCYTIDINE 5'-MONOPHOSPHATE DIHYDRATE (ABSOLUTE CONFIGURATION) ; ;H.N.LALITHA,S.RAMAKUMAR,M.A.VISWAMITRA 1989, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 45, 1652 ; dinyii10 all_ribose_gamma 1 4.10 0.006-0.010A ;SODIUM BIS(DEOXYCYTIDYLYL-(3'-5')-DEOXYGUANOSINE) DINUCLEOTIDE HEPTAHYDRATE ; 'M.COLL,X.SOLANS,M.FONT-ALTABA,J.A.SUBIRANA 1987, J.BIOMOL.STRUCT.DYN., 4, 797' dinyii10 all_ribose_gamma 2 4.10 0.006-0.010A ;SODIUM BIS(DEOXYCYTIDYLYL-(3'-5')-DEOXYGUANOSINE) DINUCLEOTIDE HEPTAHYDRATE ; 'M.COLL,X.SOLANS,M.FONT-ALTABA,J.A.SUBIRANA 1987, J.BIOMOL.STRUCT.DYN., 4, 797' dinyii10 all_ribose_gamma 3 4.10 0.006-0.010A ;SODIUM BIS(DEOXYCYTIDYLYL-(3'-5')-DEOXYGUANOSINE) DINUCLEOTIDE HEPTAHYDRATE ; 'M.COLL,X.SOLANS,M.FONT-ALTABA,J.A.SUBIRANA 1987, J.BIOMOL.STRUCT.DYN., 4, 797' dinyii10 all_ribose_gamma 4 4.10 0.006-0.010A ;SODIUM BIS(DEOXYCYTIDYLYL-(3'-5')-DEOXYGUANOSINE) DINUCLEOTIDE HEPTAHYDRATE ; 'M.COLL,X.SOLANS,M.FONT-ALTABA,J.A.SUBIRANA 1987, J.BIOMOL.STRUCT.DYN., 4, 797' duhhuj all_ribose_gamma 1 2.70 0.001-0.005A ;5-METHOXYMETHYL-2'-DEOXYURIDINE (ANTIVIRAL AGENT) ; ;O.A.L.EL-KABBANI,I.EKIEL,L.T.J.DELBAERE,G.TOURIGNY,A.L.STUART,S.V.GUPTA 1986, NUCLEOSIDES AND NUCLEOTIDES, 5, 95 ; dumtou all_ribose_gamma 1 4.20 0.001-0.005A (-)-CIS-(5S,6S)-5-HYDROXY-5-METHYL-6-ETHYLAMINO-5,6-DIHYDROTHYMIDINE ;T.HARAYAMA,R.YANADA,T.TAGA,K.MACHIDA,J.CADET,F.YONEDA 1986, J.CHEM.SOC.,CHEM.COMM.,, 1469 ; dumtou10 all_ribose_gamma 1 3.60 0.001-0.005A (5S,6S)-CIS-(+)-6-ETHYLAMINO-5-HYDROXY-5,6-DIHYDROTHYMIDINE ;T.HARAYAMA,R.YANADA,M.TANAKA,T.TAGA,K.MACHIDA,F.YONEDA,J.CADET 1988, J.CHEM.SOC.,PERKIN TRANS.1,, 2555 ; fmdurd02 all_ribose_gamma 1 3.30 0.006-0.010A '5-TRIFLUOROMETHYL-2'-DEOXYURIDINE' 'T.SATO 1989, ANAL.SCI., 5, 117' foylua all_ribose_gamma 1 4.40 0.001-0.005A '3'-O-ACETYL-2'-DEOXYADENOSINE' ;J.N.LOW,P.TOLLIN,R.A.HOWIE 1987, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 43, 2184 ; gexxiq all_ribose_gamma 1 4.90 0.001-0.005A ;3'-O-ACETYLTHYMIDINE (ORTHORHOMBIC FORM) ; ;R.S.ECCLESTON,C.C.WILSON,R.A.HOWIE 1988, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 44, 1424 ; gexxiq01 all_ribose_gamma 1 5.00 0.006-0.010A ;3'-O-ACETYLTHYMIDINE (HEXAGONAL FORM) ; 'A.SCHOUTEN,J.A.KANTERS 1991, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 47, 1320' ipdxur all_ribose_gamma 1 6.10 0.001-0.005A 'BETA-5-ISOPROPYL-2'-DEOXYURIDINE' ;M.CZUGLER,A.KALMAN,J.T.SAGI,A.SZABOLCS,L.OTVOS 1979, ACTA CRYSTALLOGR.,SECT.B, 35, 1626 ; ipdxur01 all_ribose_gamma 1 6.10 0.001-0.005A 'BETA-5-ISOPROPYL-2'-DEOXYURIDINE' 'C.MATYAS,K.ALAKOS 1993, ACTA PHARM.HUNG., 63, 193' jafhih all_ribose_gamma 2 3.10 0.001-0.005A ;2'-DEOXY-3',5'-DI-O-ACETYL GUANOSINE ; 'L.H.KOOLE,H.M.BUCK,J.A.KANTERS,A.SCHOUTEN 1988, CAN.J.CHEM., 66, 2634' jibdih all_ribose_gamma 1 3.00 0.001-0.005A ;2'-DEOXYCYTIDINIUM DIHYDROGENPHOSPHATE ; 'M.JASKOLSKI 1991, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 47, 153' jubvor all_ribose_gamma 1 4.37 0.001-0.005A ;1-(2'-DEOXY-BETA-D-RIBOFURANOSYL)-6,7-DIPHENYL-LUMAZINE (AT 183 DEG.K) ; ;XIAODONG CAO,W.PFLEIDERER,H.ROSEMEYER,F.SEELA,W.BANNWARTH,P.SCHONHOLZER 1992, HELV.CHIM.ACTA, 75, 1267 ; keclot all_ribose_gamma 1 4.30 0.006-0.010A ;8-AMINO-3,10-DIHYDRO-10-OXO-3-(BETA-D-2-DEOXYRIBOFURANOSYL)-3H-1,3,5-TRIAZINO(1,2-A)PURINE MONOHYDRATE DIDA'-METAMORPHOSINE MONOHYDRATE ; 'S.KUMAR,F.T.OAKES,S.R.WILSON,N.J.LEONARD 1988, HETEROCYCLES, 27, 2891' poggat all_ribose_gamma 1 4.20 0.006-0.010A ;BIS(2'-DEOXYCYTIDINE) DIHYDROGEN PHOSPHATE ; ;M.JASKOLSKI,M.GDANIEC,M.GILSKI,M.ALEJSKA,M.D.BRATEK-WIEWIOROWSKA 1994, J.BIOMOL.STRUCT.DYN., 11, 1287 ; poggat all_ribose_gamma 2 4.20 0.006-0.010A ;BIS(2'-DEOXYCYTIDINE) DIHYDROGEN PHOSPHATE ; ;M.JASKOLSKI,M.GDANIEC,M.GILSKI,M.ALEJSKA,M.D.BRATEK-WIEWIOROWSKA 1994, J.BIOMOL.STRUCT.DYN., 11, 1287 ; poggat all_ribose_gamma 3 4.20 0.006-0.010A ;BIS(2'-DEOXYCYTIDINE) DIHYDROGEN PHOSPHATE ; ;M.JASKOLSKI,M.GDANIEC,M.GILSKI,M.ALEJSKA,M.D.BRATEK-WIEWIOROWSKA 1994, J.BIOMOL.STRUCT.DYN., 11, 1287 ; poggat all_ribose_gamma 4 4.20 0.006-0.010A ;BIS(2'-DEOXYCYTIDINE) DIHYDROGEN PHOSPHATE ; ;M.JASKOLSKI,M.GDANIEC,M.GILSKI,M.ALEJSKA,M.D.BRATEK-WIEWIOROWSKA 1994, J.BIOMOL.STRUCT.DYN., 11, 1287 ; pryurd10 all_ribose_gamma 1 2.70 0.006-0.010A '5-(2-PROPYNYLOXY)-2'-DEOXYURIDINE' 'G.S.D.KING,L.SENGIER-ROBERTS 1982, J.CHEM.RES., 25, 722' sifkex all_ribose_gamma 1 2.80 0.001-0.005A ;5-((1S,2S)-2-CHLOROCYCLOPROPYL)-1-(2-DEOXY-BETA-D-RIBOFURANOSYL)URACIL (ABSOLUTE CONFIGURATION) ; ;S.C.MOSIMANN,B.D.SANTARSIERO,M.N.G.JAMES,M.TANDON,L.I.WIEBE,E.E.KNAUS 1990, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 46, 2115 ; vexdor all_ribose_gamma 1 4.40 0.001-0.005A ;5-METHOXYMETHYL-2'-DEOXYCYTIDINE (ANTIVIRAL AGENT) MMDCYD ; ;ZONGCHAO JIA,G.TOURIGNY,L.T.J.DELBAERE,A.L.STUART,S.V.GUPTA 1990, CAN.J.CHEM., 68, 836 ; vexdor all_ribose_gamma 2 4.40 0.001-0.005A ;5-METHOXYMETHYL-2'-DEOXYCYTIDINE (ANTIVIRAL AGENT) MMDCYD ; ;ZONGCHAO JIA,G.TOURIGNY,L.T.J.DELBAERE,A.L.STUART,S.V.GUPTA 1990, CAN.J.CHEM., 68, 836 ; zasquf all_ribose_gamma 1 3.80 0.001-0.005A ;3'-O-METHYLTHIOMETHYLTHYMIDINE MONOHYDRATE (POTENTIAL INHIBITORY ACTIVITY AGAINST HIV) ; ;V.A.BOCHKAREV,S.G.ZAVGORODNY,A.S.ZHDANOV,G.V.GURSKAYA 1995, BIOORG.KHIM., 21, 206 ; zasram all_ribose_gamma 1 2.80 0.001-0.005A ;3'-O-METHYLSULFINYLMETHYLTHYMIDINE (POTENTIAL INHIBITORY ACTIVITY AGAINST HIV) ; ;V.A.BOCHKAREV,S.G.ZAVGORODNY,A.S.ZHDANOV,G.V.GURSKAYA 1995, BIOORG.KHIM., 21, 206 ; zedhiz all_ribose_gamma 1 5.40 0.006-0.010A ;(1S,6S)-6,7,7,8,8-PENTAMETHYL-2-(BETA-D-2-DEOXYRIBOFURANOSYL)-CIS-2,4-DIAZABICYCLO(4.2.0)OCTANE-3,5-DIONE ; 'N.HAGA,I.ISHIKAWA,H.TAKAYANAGI,H.OGURA 1994, BULL.CHEM.SOC.JPN., 67, 728' docytc all_ribose_gamma 1 3.50 0.001-0.005A ;2'-DEOXYCYTIDINE HYDROCHLORIDE (ABSOLUTE CONFIGURATION) ; 'E.SUBRAMANIAN,D.J.HUNT 1970, ACTA CRYSTALLOGR.,SECT.B, 26, 303' gidtiw all_ribose_gamma 1 4.20 0.006-0.010A 'N-4--(UREIDOCARBONYL)-2'DEOXYCYTIDINE' 'S.KUMAR,N.J.LEONARD 1988, J.ORG.CHEM., 53, 3959' zozvuf all_ribose_gamma 1 4.56 0.001-0.005A ;(4-AMINO-1-(2-DEOXY-BETA-D-RIBOFURANOSYL)-2-OXO-1H-3-PYRIMIDINIO)(CYANO)BORATE MONOHYDRATE (IN VIVO ANTINEOPLASTIC ACTIVITY AGAINST VARIOUS TUMORS, WITH POTENTIAL USE IN BORON NEUTRON-CAPTURE THERAPY FOR BRAIN CANCER) 2'-DEOXYCYTIDINE-N(3)-CYANOBORANE MONOHYDRATE ; ;P.SINGH,M.ZOTTOLA,SAQING HUANG,B.R.SHAW,L.G.PEDERSEN 1996, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 52, 693 ; acados all_ribose_gamma 1 4.10 0.006-0.010A '3'-O-ACETYLADENOSINE' 'S.T.RAO,M.SUNDARALINGAM 1970, J.AM.CHEM.SOC., 92, 4963' adoshc all_ribose_gamma 1 3.70 0.001-0.005A 'ADENOSINE HYDROCHLORIDE' 'K.SHIKATA,T.UEKI,T.MITSUI 1973, ACTA CRYSTALLOGR.,SECT.B, 29, 31' amurid all_ribose_gamma 1 7.60 0.006-0.010A 5-AMINOURIDINE 'E.EGERT,H.J.LINDNER,W.HILLEN,H.G.GASSEN 1978, ACTA CRYSTALLOGR.,SECT.B, 34, 2204' bibxit all_ribose_gamma 1 5.10 0.006-0.010A '4-AMINO-1-BETA-D-RIBOFURANOSYL-PYRIMIDINE-2,6(1H,3H)-DIONE MONOHYDRATE' 'J.GORSKI,P.TOLLIN 1982, CRYST.STRUCT.COMMUN., 11, 543' bimfei10 all_ribose_gamma 1 3.70 0.001-0.005A 1,N-6--ETHENOADENOSINE 'M.JASKOLSKI 1982, ACTA CRYSTALLOGR.,SECT.B, 38, 3171' bimfim10 all_ribose_gamma 1 4.50 0.001-0.005A '1,N-6--ETHENOADENOSINE HYDROCHLORIDE' 'M.JASKOLSKI 1984, J.CRYSTALLOGR.SPECTROSC.RES., 14, 45' clurid10 all_ribose_gamma 1 3.15 0.001-0.005A 5-CHLOROURIDINE 'S.W.HAWKINSON,C.L.COULTER 1971, ACTA CRYSTALLOGR.,SECT.B, 27, 34' coczid all_ribose_gamma 1 3.90 0.001-0.005A 'ADENOSINE-5'-O-DIETHYL-PHOSPHATE' 'R.G.BRENNAN,N.S.KONDO,M.SUNDARALINGAM 1984, J.AM.CHEM.SOC., 106, 5671' coxnei all_ribose_gamma 1 3.10 0.001-0.005A '8-CHLORO-GUANOSINE DIHYDRATE' 'G.I.BIRNBAUM,P.LASSOTA,D.SHUGAR 1984, BIOCHEMISTRY, 23, 5048' cutvao all_ribose_gamma 1 3.90 0.001-0.005A XANTHOSINE 'B.LESYNG,C.MARCK,W.SAENGER 1984, Z.NATURFORSCH.,TEIL C, 39, 720' cytiac01 all_ribose_gamma 1 7.30 0.006-0.010A ;CYTIDINE-3'-PHOSPHATE (MONOCLINIC FORM) CYTIDYLIC ACID B ; 'C.E.BUGG,R.E.MARSH 1967, J.MOL.BIOL., 25, 67' cyticl all_ribose_gamma 1 2.80 0.001-0.005A 'CYTIDINIUM CHLORIDE' 'A.MOSSET,J.J.BONNET,J.GALY 1979, ACTA CRYSTALLOGR.,SECT.B, 35, 1908' demxey all_ribose_gamma 1 5.30 0.006-0.010A '8-METHYLGUANOSINE TRIHYDRATE' ;K.HAMADA,I.HONDA,S.FUJII,T.FUJIWARA,K.-I.TOMITA 1985, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 41, 1486 ; dotxuf10 all_ribose_gamma 1 5.70 0.001-0.005A ;TRYPTAMINIUM 7-METHYLGUANOSINE 5'-MONOPHOSPHATE TRIHYDRATE ; 'T.ISHIDA,M.DOI,H.UEDA,M.INOUE,G.M.SHELDRICK 1988, J.AM.CHEM.SOC., 110, 2286' fucwij all_ribose_gamma 1 4.90 0.001-0.005A 'N-6--DIDEHYDRO-1,6-DIHYDRO-1-METHYLADENOSINE TRIHYDRATE' 'Y.YAMAGATA,K.-I.TOMITA 1987, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 43, 2117' gicmou all_ribose_gamma 1 4.10 0.001-0.005A 'N-4--AMINOCYTIDINE HEMIHYDRATE (MUTAGENIC ACTIVITY)' ;S.KASHINO,K.NEGISHI,H.HAYATSU 1988, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 44, 1454 ; gicmou all_ribose_gamma 2 4.10 0.001-0.005A 'N-4--AMINOCYTIDINE HEMIHYDRATE (MUTAGENIC ACTIVITY)' ;S.KASHINO,K.NEGISHI,H.HAYATSU 1988, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 44, 1454 ; guansh10 all_ribose_gamma 1 3.60 0.001-0.005A 'GUANOSINE DIHYDRATE' 'U.THEWALT,C.E.BUGG,R.E.MARSH 1970, ACTA CRYSTALLOGR.,SECT.B, 26, 1089' guansh10 all_ribose_gamma 2 3.60 0.001-0.005A 'GUANOSINE DIHYDRATE' 'U.THEWALT,C.E.BUGG,R.E.MARSH 1970, ACTA CRYSTALLOGR.,SECT.B, 26, 1089' guopna10 all_ribose_gamma 1 5.60 0.006-0.010A ;DISODIUM GUANOSINE-5'-PHOSPHATE HEPTAHYDRATE ; 'C.L.BARNES,S.W.HAWKINSON 1982, ACTA CRYSTALLOGR.,SECT.B, 38, 812' guopna10 all_ribose_gamma 2 5.60 0.006-0.010A ;DISODIUM GUANOSINE-5'-PHOSPHATE HEPTAHYDRATE ; 'C.L.BARNES,S.W.HAWKINSON 1982, ACTA CRYSTALLOGR.,SECT.B, 38, 812' guopna11 all_ribose_gamma 1 5.70 0.006-0.010A ;DISODIUM GUANOSINE-5'-PHOSPHATE HEPTAHYDRATE ; 'S.K.KATTI,T.P.SESHADRI,M.A.VISWAMITRA 1981, ACTA CRYSTALLOGR.,SECT.B, 37, 1825' guopna11 all_ribose_gamma 2 5.70 0.006-0.010A ;DISODIUM GUANOSINE-5'-PHOSPHATE HEPTAHYDRATE ; 'S.K.KATTI,T.P.SESHADRI,M.A.VISWAMITRA 1981, ACTA CRYSTALLOGR.,SECT.B, 37, 1825' hipads all_ribose_gamma 1 3.10 0.001-0.005A '8-(ALPHA-HYDROXYISOPROPYL)-ADENOSINE DIHYDRATE' 'G.I.BIRNBAUM,D.SHUGAR 1978, BIOCHIM.BIOPHYS.ACTA, 517, 500' hxurid all_ribose_gamma 1 2.60 0.001-0.005A 5-HYDROXYURIDINE 'U.THEWALT,C.E.BUGG 1973, ACTA CRYSTALLOGR.,SECT.B, 29, 1393' jawjia all_ribose_gamma 1 2.96 0.001-0.005A '7-METHYL-8-OXO-7,8-DIHYDROGUANOSINE MONOHYDRATE' ;S.B.LARSON,H.B.COTTAM,R.K.ROBINS 1989, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 45, 1979 ; kehzay all_ribose_gamma 1 2.86 0.001-0.005A ;2-AMINO-7-METHYL-9-(BETA-D-RIBOFURANOSYL)-8(9H)-THIOXOPURIN-6(1H)-ONE MONOHYDRATE (IMMUNE SYSTEM STIMULATORY ACTION) ; ;S.B.LARSON,E.M.HENRY,G.D.KINI,R.K.ROBINS 1990, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 46, 506 ; kurdmp all_ribose_gamma 1 3.50 0.001-0.005A ;POTASSIUM DIHYDROURIDINE-3'-MONOPHOSPHATE HEMIHYDRATE ; 'J.EMERSON,M.SUNDARALINGAM 1980, ACTA CRYSTALLOGR.,SECT.B, 36, 537' lumzrf01 all_ribose_gamma 1 5.90 0.001-0.005A 6,7-DIMETHYL-N-1-BETA-D-RIBOFURANOSYL-LUMAZINE 'W.SAENGER,G.RITZMANN,W.PFLEIDERER 1977, ACTA CRYSTALLOGR.,SECT.B, 33, 2989' lumzrf01 all_ribose_gamma 2 5.90 0.001-0.005A 6,7-DIMETHYL-N-1-BETA-D-RIBOFURANOSYL-LUMAZINE 'W.SAENGER,G.RITZMANN,W.PFLEIDERER 1977, ACTA CRYSTALLOGR.,SECT.B, 33, 2989' pctrib10 all_ribose_gamma 1 4.10 0.001-0.005A N-6--(N-THREONYLCARBONYL)ADENOSINE 'R.PARTHASARATHY,J.M.OHRT,G.B.CHHEDA 1977, BIOCHEMISTRY, 16, 4999' selzis all_ribose_gamma 1 4.10 0.001-0.005A 3-(8-XANTHOSYL)XANTHINE 'XINHUA JI,P.SUBRAMANIAN,D.VAN DER HELM,G.DRYHURST 1990, J.ORG.CHEM., 55, 1291' selzis all_ribose_gamma 2 4.10 0.001-0.005A 3-(8-XANTHOSYL)XANTHINE 'XINHUA JI,P.SUBRAMANIAN,D.VAN DER HELM,G.DRYHURST 1990, J.ORG.CHEM., 55, 1291' uridmp10 all_ribose_gamma 1 5.10 0.006-0.010A ;URIDINE-3'-MONOPHOSPHATE MONOHYDRATE ; 'T.SRIKRISHNAN,S.M.FRIDEY,R.PARTHASARATHY 1979, J.AM.CHEM.SOC., 101, 3739' vuymad all_ribose_gamma 1 2.90 0.001-0.005A 'CYTIDINIUM DIHYDROGENPHOSPHATE' 'M.JASKOLSKI 1989, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 45, 85' yidkif all_ribose_gamma 1 2.97 0.001-0.005A 'BIS(CYTIDINIUM) SULFATE' 'M.GILSKI,M.JASKOLSKI 1993, POL.J.CHEM., 67, 1841' yidkif all_ribose_gamma 2 2.97 0.001-0.005A 'BIS(CYTIDINIUM) SULFATE' 'M.GILSKI,M.JASKOLSKI 1993, POL.J.CHEM., 67, 1841' zaytic all_ribose_gamma 1 3.45 0.001-0.005A '3-METHYLURIDINE (ABSOLUTE CONFIGURATION BY REFINEMENT OF THE FLACK PARAMETER)' ;B.L.PARTRIDGE,C.E.PRITCHARD 1995, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 51, 1929 ; zexwee all_ribose_gamma 1 3.66 0.006-0.010A ;2-CHLORO-N-(1-PHENYL-2(R)-PROPYL)-9-BETA-D-RIBOFURANOSYL-9H-PURIN-6-AMINE (ACTIVATING AGENT OF ADENOSINE A2 RECEPTOR) N-(1-PHENYL-2(R)-PROPYL)-2-CHLORO-ADENOSINE ; 'A.K.DAS,V.BERTOLASI 1995, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 51, 2408' admpot10 all_ribose_gamma 1 2.90 0.001-0.005A ;ADENOSINE-5'-METHYLPHOSPHONATE HEMIHYDRATE ; 'C.L.BARNES,S.W.HAWKINSON 1979, ACTA CRYSTALLOGR.,SECT.B, 35, 1724' admpot10 all_ribose_gamma 2 2.90 0.001-0.005A ;ADENOSINE-5'-METHYLPHOSPHONATE HEMIHYDRATE ; 'C.L.BARNES,S.W.HAWKINSON 1979, ACTA CRYSTALLOGR.,SECT.B, 35, 1724' adypur10 all_ribose_gamma 1 5.70 0.006-0.010A ;SODIUM ADENYLYL-(3'-5')-URIDINE DINUCLEOTIDE HEXAHYDRATE ; ;N.C.SEEMAN,J.M.ROSENBERG,F.L.SUDDATH,J.J.P.KIM,A.RICH 1976, J.MOL.BIOL., 104, 109 ; adypur10 all_ribose_gamma 2 5.70 0.006-0.010A ;SODIUM ADENYLYL-(3'-5')-URIDINE DINUCLEOTIDE HEXAHYDRATE ; ;N.C.SEEMAN,J.M.ROSENBERG,F.L.SUDDATH,J.J.P.KIM,A.RICH 1976, J.MOL.BIOL., 104, 109 ; adypur10 all_ribose_gamma 3 5.70 0.006-0.010A ;SODIUM ADENYLYL-(3'-5')-URIDINE DINUCLEOTIDE HEXAHYDRATE ; ;N.C.SEEMAN,J.M.ROSENBERG,F.L.SUDDATH,J.J.P.KIM,A.RICH 1976, J.MOL.BIOL., 104, 109 ; adypur10 all_ribose_gamma 4 5.70 0.006-0.010A ;SODIUM ADENYLYL-(3'-5')-URIDINE DINUCLEOTIDE HEXAHYDRATE ; ;N.C.SEEMAN,J.M.ROSENBERG,F.L.SUDDATH,J.J.P.KIM,A.RICH 1976, J.MOL.BIOL., 104, 109 ; apapad10 all_ribose_gamma 1 6.80 0.001-0.005A ;ADENYLYL-(3',5')-ADENYLYL-(3',5')-ADENOSINE TRINUCLEOTIDE HEXAHYDRATE (FORM I) ; 'D.SUCK,P.C.MANOR,W.SAENGER 1976, ACTA CRYSTALLOGR.,SECT.B, 32, 1727' apapad10 all_ribose_gamma 2 6.80 0.001-0.005A ;ADENYLYL-(3',5')-ADENYLYL-(3',5')-ADENOSINE TRINUCLEOTIDE HEXAHYDRATE (FORM I) ; 'D.SUCK,P.C.MANOR,W.SAENGER 1976, ACTA CRYSTALLOGR.,SECT.B, 32, 1727' apapad10 all_ribose_gamma 3 6.80 0.001-0.005A ;ADENYLYL-(3',5')-ADENYLYL-(3',5')-ADENOSINE TRINUCLEOTIDE HEXAHYDRATE (FORM I) ; 'D.SUCK,P.C.MANOR,W.SAENGER 1976, ACTA CRYSTALLOGR.,SECT.B, 32, 1727' beurid10 all_ribose_gamma 1 3.30 0.001-0.005A URIDINE ;E.A.GREEN,R.D.ROSENSTEIN,R.SHIONO,D.J.ABRAHAM,B.L.TRUS,R.E.MARSH 1975, ACTA CRYSTALLOGR.,SECT.B, 31, 102 ; beurid10 all_ribose_gamma 2 3.30 0.001-0.005A URIDINE ;E.A.GREEN,R.D.ROSENSTEIN,R.SHIONO,D.J.ABRAHAM,B.L.TRUS,R.E.MARSH 1975, ACTA CRYSTALLOGR.,SECT.B, 31, 102 ; cytidi01 all_ribose_gamma 1 2.87 0.001-0.005A '4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE BETA-CYTIDINE' 'D.L.WARD 1993, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 49, 1789' cytidi02 all_ribose_gamma 1 5.40 0.001-0.005A 'BETA-CYTIDINE (AT 123 DEG.K, HIGH RESOLUTION REFINEMENT.)' 'LIRONG CHEN,B.M.CRAVEN 1995, ACTA CRYSTALLOGR.,SECT.B (STR.SCI.), 51, 1081' cytidn all_ribose_gamma 1 2.60 0.006-0.010A 'CYTIDINIUM NITRATE' ;J.J.GUY,L.R.NASSIMBENI,G.M.SHELDRICK,R.TAYLOR 1976, ACTA CRYSTALLOGR.,SECT.B, 32, 2909 ; guanph01 all_ribose_gamma 1 3.00 0.001-0.005A ;GUANOSINE-5'-MONOPHOSPHATE TRIHYDRATE (REDETERMINATION OF MURAYAMA ET AL,ACTA CRYST.,B25,2236,1969) ; 'J.EMERSON,M.SUNDARALINGAM 1980, ACTA CRYSTALLOGR.,SECT.B, 36, 1510' hifkem all_ribose_gamma 1 3.60 0.006-0.010A ;TETRASODIUM P,P''-BIS(5'-ADENOSYL)TETRAPHOSPHATE DODECAHYDRATE ; ;D.WATANABE,M.ISHIKAWA,M.YAMASAKI,M.OZAKI,T.KATAYAMA,H.NAKAJIMA 1996, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 52, 338 ; hifkem all_ribose_gamma 2 3.60 0.006-0.010A ;TETRASODIUM P,P''-BIS(5'-ADENOSYL)TETRAPHOSPHATE DODECAHYDRATE ; ;D.WATANABE,M.ISHIKAWA,M.YAMASAKI,M.OZAKI,T.KATAYAMA,H.NAKAJIMA 1996, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 52, 338 ; jucjas all_ribose_gamma 1 6.53 0.006-0.010A '5-CARBOXYMETHYLAMINOMETHYLURIDINE MONOHYDRATE' 'Z.GALDECKI,B.LUCIAK,A.MALKIEWICZ,B.NAWROT 1991, MONATSH.CHEM., 122, 487' meurid all_ribose_gamma 1 7.50 0.006-0.010A '5-METHYLURIDINE HEMIHYDRATE' 'D.J.HUNT,E.SUBRAMANIAN 1969, ACTA CRYSTALLOGR.,SECT.B, 25, 2144' mxurid01 all_ribose_gamma 1 3.10 0.001-0.005A 5-METHOXYURIDINE 'G.I.BIRNBAUM,W.J.P.BLONSKI,F.E.HRUSKA 1983, CAN.J.CHEM., 61, 2299' pucglr10 all_ribose_gamma 1 4.60 0.006-0.010A N-6--(N-GLYCYLCARBONYL)ADENOSINE 'R.PARTHASARATHY,J.M.OHRT,G.B.CHHEDA 1977, BIOCHEMISTRY, 16, 4999' taljar all_ribose_gamma 1 3.60 0.001-0.005A '4-AMINO-5-METHYL-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE 5-METHYLCYTIDINE' ;N.PADMAJA,S.RAMAKUMAR,M.A.VISWAMITRA 1991, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 47, 1445 ; taljar all_ribose_gamma 2 3.60 0.001-0.005A '4-AMINO-5-METHYL-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE 5-METHYLCYTIDINE' ;N.PADMAJA,S.RAMAKUMAR,M.A.VISWAMITRA 1991, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 47, 1445 ; uroame all_ribose_gamma 1 4.00 0.006-0.010A 'URIDINE-5-OXYACETIC ACID METHYL ESTER MONOHYDRATE' 'K.MORIKAWA,K.TORII,Y.IITAKA,M.TSUBOI 1975, ACTA CRYSTALLOGR.,SECT.B, 31, 1004' . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . gidtiw deoxyribose_C3endo_pyrimidine 1 4.20 0.006-0.010A . . hevxov deoxyribose_C3endo_pyrimidine 1 3.00 0.001-0.005A . . zozvuf deoxyribose_C3endo_pyrimidine 1 4.56 0.001-0.005A . . . C3endo_pyrimidine_anti . . . . . . C3endo_pyrimidine_anti . . . . . . C3endo_pyrimidine_anti . . . . . . C3endo_pyrimidine_anti . . . . . . C3endo_pyrimidine_anti . . . . . . C3endo_pyrimidine_anti . . . . . . C3endo_pyrimidine_anti . . . . . . C3endo_pyrimidine_anti . . . . . . C3endo_pyrimidine_anti . . . . . . C3endo_pyrimidine_anti . . . . . . C3endo_pyrimidine_anti . . . . . . C3endo_pyrimidine_anti . . . . . . C3endo_pyrimidine_anti . . . . . . C3endo_pyrimidine_anti . . . . . . C3endo_pyrimidine_anti . . . . . . C3endo_pyrimidine_anti . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_4 . . . . . #