# Minimized with a chisquare of 0.072938. ################################################################################ # # File: Cpro_riboseC2endo_O3H_O5P_anti_+sc # Date: 08-Dec-97 19:57:02 # # This file was created by software developed by the # Nucleic Acid Database Project # # H. M. Berman, W. K. Olson, D. L. Beveridge, J. D. Westbrook, A. Gelbin, # T. Demeny, S. H. Shieh, A. R. Srinivasan, and B. Schneider. (1992). # The Nucleic Acid Database: A Comprehensive Relational Database of # Three-Dimensional Structures of Nucleic Acids. Biophys J., 63, 751-759. # # Questions or comments should be directed to: # # # ndbadmin@ndbserver.rutgers.edu # ################################################################################ data_Cpro_riboseC2endo_O3H_O5P_anti_+sc # _chem_comp.id Cpro_riboseC2endo_O3H_O5P_anti_+sc _chem_comp.name ;protonated cytidine-5'-phosphate ; _chem_comp.type 'RNA linking' _chem_comp.model_details ;Model constructed for protonated cytidine-5'-phosphate from subcomponents for protonated base, sugar and phosphate. The sugar is ribose in the C2'-endo conformation, and geometries for the gamma torsion angle (synclinal), the chi torsion angle (antiperiplanar), and the C3*-O3* and C5*-O5* bonds are inserted from other models. ; _chem_comp.parent . _chem_comp.formula 'H11 C9 N3 O8 P1 ' _chem_comp.formula_weight 320.20 _chem_comp.number_atoms_all 32 _chem_comp.number_atoms_nh 21 _chem_comp.ndb_formal_charge -1 # loop_ _ndb_composite.comp_id _ndb_composite.sub_comp_id _ndb_composite.sub_type _ndb_composite.details Cpro_riboseC2endo_O3H_O5P_anti_+sc cyt_pro base 'Model constructed for protonated cytosine with an N1-glycosidic linkage.' Cpro_riboseC2endo_O3H_O5P_anti_+sc ribose_C2endo_O3H_O5P_+sc sugar ;Model constructed for 1'-amino-ribose in the C2'-endo conformation. the gamma torsion (synclinal), the corresponding O4*-C4*-C5*-O5* torsion, and the C3*-O3* and C5*-O5* bond geometries are inserted from other models. ; Cpro_riboseC2endo_O3H_O5P_anti_+sc PO4 phosphate . # loop_ _chem_comp_link.link_id _chem_comp_link.type_comp_1 _chem_comp_link.type_comp_2 _chem_comp_link.ndb_comp_id_comp_1 _chem_comp_link.ndb_comp_id_comp_2 ribose_pyrimidine sugar base ribose_C2endo_O3H_O5P_+sc cyt_pro ribose_O5_PO4 sugar phosphate ribose_C2endo_O3H_O5P_+sc PO4 # loop_ _ndb_dbsearch.db _ndb_dbsearch.sample_size _ndb_dbsearch.id _ndb_dbsearch.dbversion _ndb_dbsearch.time _ndb_dbsearch.dbreleasedate _ndb_dbsearch.comp_id csd 21 cyt_pro 512 ;Mon Dec 8 13:26:10 1997 ; 'Sep 15 19:34:11 BST 1996' Cpro_riboseC2endo_O3H_O5P_anti_+sc csd 50 ribose 512 ;Mon Dec 8 13:30:59 1997 ; 'Sep 15 19:34:11 BST 1996' Cpro_riboseC2endo_O3H_O5P_anti_+sc csd 46 ribose_C2endo_O3H 512 ;Mon Dec 8 13:39:08 1997 ; 'Sep 15 19:34:11 BST 1996' Cpro_riboseC2endo_O3H_O5P_anti_+sc csd 9 ribose_C2endo_O5P 512 ;Mon Dec 8 13:44:20 1997 ; 'Sep 15 19:34:11 BST 1996' Cpro_riboseC2endo_O3H_O5P_anti_+sc csd 94 all_ribose_gamma 512 ;Mon Dec 8 14:31:38 1997 ; 'Sep 15 19:34:11 BST 1996' Cpro_riboseC2endo_O3H_O5P_anti_+sc ndb 15 PO4_1 . . . Cpro_riboseC2endo_O3H_O5P_anti_+sc csd 16 ribose_C2endo_pyrimidine 512 'Sat Aug 23 13:11:01 1997' 'Sep 15 19:34:11 BST 1996' Cpro_riboseC2endo_O3H_O5P_anti_+sc csd 38 C2endo_pyrimidine_anti . . . Cpro_riboseC2endo_O3H_O5P_anti_+sc ndb 15 phosphate_O5_1 . . . Cpro_riboseC2endo_O3H_O5P_anti_+sc # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.substruct_code _chem_comp_atom.charge _chem_comp_atom.model_cartn_x _chem_comp_atom.model_cartn_y _chem_comp_atom.model_cartn_z Cpro_riboseC2endo_O3H_O5P_anti_+sc N1 N base 0 4.2132 0.0760 0.5473 Cpro_riboseC2endo_O3H_O5P_anti_+sc C2 C base 0 5.4874 0.1427 0.0205 Cpro_riboseC2endo_O3H_O5P_anti_+sc N3 N base 1 6.3005 1.1278 0.5300 Cpro_riboseC2endo_O3H_O5P_anti_+sc C4 C base 0 5.9346 1.9845 1.5089 Cpro_riboseC2endo_O3H_O5P_anti_+sc C5 C base 0 4.6233 1.8804 2.0248 Cpro_riboseC2endo_O3H_O5P_anti_+sc C6 C base 0 3.8115 0.9337 1.5340 Cpro_riboseC2endo_O3H_O5P_anti_+sc O2 O base 0 5.8775 -0.6240 -0.8406 Cpro_riboseC2endo_O3H_O5P_anti_+sc N4 N base 0 6.8018 2.8756 1.9337 Cpro_riboseC2endo_O3H_O5P_anti_+sc H4A H base 0 . . . Cpro_riboseC2endo_O3H_O5P_anti_+sc H4B H base 0 . . . Cpro_riboseC2endo_O3H_O5P_anti_+sc H5 H base 0 . . . Cpro_riboseC2endo_O3H_O5P_anti_+sc H6 H base 0 . . . Cpro_riboseC2endo_O3H_O5P_anti_+sc C1* C sugar 0 3.2567 -0.6506 -0.1523 Cpro_riboseC2endo_O3H_O5P_anti_+sc C2* C sugar 0 3.7224 -1.1880 -1.5019 Cpro_riboseC2endo_O3H_O5P_anti_+sc C3* C sugar 0 3.5138 0.0305 -2.3954 Cpro_riboseC2endo_O3H_O5P_anti_+sc C4* C sugar 0 2.2443 0.6494 -1.8204 Cpro_riboseC2endo_O3H_O5P_anti_+sc C5* C sugar 0 0.9655 0.2733 -2.5309 Cpro_riboseC2endo_O3H_O5P_anti_+sc O2* O sugar 0 5.0503 -1.6638 -1.4575 Cpro_riboseC2endo_O3H_O5P_anti_+sc O3* O sugar 0 4.6020 0.9295 -2.2264 Cpro_riboseC2endo_O3H_O5P_anti_+sc O4* O sugar 0 2.1695 0.2068 -0.4373 Cpro_riboseC2endo_O3H_O5P_anti_+sc O5* O sugar 0 0.8398 -1.1563 -2.6525 Cpro_riboseC2endo_O3H_O5P_anti_+sc HA1* H sugar 0 . . . Cpro_riboseC2endo_O3H_O5P_anti_+sc HA2* H sugar 0 . . . Cpro_riboseC2endo_O3H_O5P_anti_+sc HAO2* H sugar 0 . . . Cpro_riboseC2endo_O3H_O5P_anti_+sc HA3* H sugar 0 . . . Cpro_riboseC2endo_O3H_O5P_anti_+sc HA4* H sugar 0 . . . Cpro_riboseC2endo_O3H_O5P_anti_+sc HA5* H sugar 0 . . . Cpro_riboseC2endo_O3H_O5P_anti_+sc HB5* H sugar 0 . . . Cpro_riboseC2endo_O3H_O5P_anti_+sc P P phosphate 0 2.0296 -2.1217 -2.2165 Cpro_riboseC2endo_O3H_O5P_anti_+sc O1P O phosphate 0 1.5020 -3.4597 -1.8463 Cpro_riboseC2endo_O3H_O5P_anti_+sc O2P O phosphate -1 2.9482 -1.4230 -1.2819 Cpro_riboseC2endo_O3H_O5P_anti_+sc O O phosphate -1 2.8039 -2.3044 -3.4704 # loop_ _chem_comp_chir.comp_id _chem_comp_chir.id _chem_comp_chir.atom_id _chem_comp_chir.number_atoms_all _chem_comp_chir.number_atoms_nh _chem_comp_chir.volume_flag _chem_comp_chir.volume_three _chem_comp_chir.volume_three_esd _chem_comp_chir.ndb_plane_flag _chem_comp_chir.ndb_plane_three _chem_comp_chir.ndb_plane_three_esd Cpro_riboseC2endo_O3H_O5P_anti_+sc 1 C1* 4 3 sign 2.42 0.08 sign 52.81 1.92 Cpro_riboseC2endo_O3H_O5P_anti_+sc 2 C2* 4 3 sign -2.51 0.09 sign -51.10 2.20 Cpro_riboseC2endo_O3H_O5P_anti_+sc 3 C3* 4 3 sign -2.73 0.05 sign -57.76 1.38 Cpro_riboseC2endo_O3H_O5P_anti_+sc 4 C4* 4 3 sign 2.49 0.07 sign 50.86 1.82 # loop_ _chem_comp_chir_atom.chir_id _chem_comp_chir_atom.enum _chem_comp_chir_atom.comp_id _chem_comp_chir_atom.atom_id 1 1 Cpro_riboseC2endo_O3H_O5P_anti_+sc O4* 1 2 Cpro_riboseC2endo_O3H_O5P_anti_+sc C2* 1 3 Cpro_riboseC2endo_O3H_O5P_anti_+sc N 2 1 Cpro_riboseC2endo_O3H_O5P_anti_+sc C1* 2 2 Cpro_riboseC2endo_O3H_O5P_anti_+sc C3* 2 3 Cpro_riboseC2endo_O3H_O5P_anti_+sc O2* 3 1 Cpro_riboseC2endo_O3H_O5P_anti_+sc C2* 3 2 Cpro_riboseC2endo_O3H_O5P_anti_+sc C4* 3 3 Cpro_riboseC2endo_O3H_O5P_anti_+sc O3* 4 1 Cpro_riboseC2endo_O3H_O5P_anti_+sc C3* 4 2 Cpro_riboseC2endo_O3H_O5P_anti_+sc O4* 4 3 Cpro_riboseC2endo_O3H_O5P_anti_+sc C5* # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.value_dist _chem_comp_bond.value_dist_esd Cpro_riboseC2endo_O3H_O5P_anti_+sc N1 C2 sing 1.3798 0.0117 Cpro_riboseC2endo_O3H_O5P_anti_+sc C2 N3 sing 1.3755 0.0161 Cpro_riboseC2endo_O3H_O5P_anti_+sc N3 C4 doub 1.3515 0.0082 Cpro_riboseC2endo_O3H_O5P_anti_+sc C4 C5 sing 1.4131 0.0072 Cpro_riboseC2endo_O3H_O5P_anti_+sc C5 C6 doub 1.3401 0.0101 Cpro_riboseC2endo_O3H_O5P_anti_+sc C6 N1 sing 1.3673 0.0094 Cpro_riboseC2endo_O3H_O5P_anti_+sc C2 O2 doub 1.2171 0.0128 Cpro_riboseC2endo_O3H_O5P_anti_+sc C4 N4 sing 1.3140 0.0127 Cpro_riboseC2endo_O3H_O5P_anti_+sc N4 H4A sing . . Cpro_riboseC2endo_O3H_O5P_anti_+sc N4 H4B sing . . Cpro_riboseC2endo_O3H_O5P_anti_+sc C5 H5 sing . . Cpro_riboseC2endo_O3H_O5P_anti_+sc C6 H6 sing . . Cpro_riboseC2endo_O3H_O5P_anti_+sc C1* C2* sing 1.5260 0.0113 Cpro_riboseC2endo_O3H_O5P_anti_+sc C1* HA1* sing 1.516 0.008 Cpro_riboseC2endo_O3H_O5P_anti_+sc C2* C3* sing 1.5255 0.0110 Cpro_riboseC2endo_O3H_O5P_anti_+sc C2* HA2* sing 1.516 0.008 Cpro_riboseC2endo_O3H_O5P_anti_+sc C3* C4* sing 1.5246 0.0129 Cpro_riboseC2endo_O3H_O5P_anti_+sc C3* HA3* sing 1.516 0.008 Cpro_riboseC2endo_O3H_O5P_anti_+sc C4* O4* sing 1.4539 0.0076 Cpro_riboseC2endo_O3H_O5P_anti_+sc C4* HA4* sing 1.516 0.008 Cpro_riboseC2endo_O3H_O5P_anti_+sc O4* C1* sing 1.4135 0.0091 Cpro_riboseC2endo_O3H_O5P_anti_+sc C2* O2* sing 1.4113 0.0124 Cpro_riboseC2endo_O3H_O5P_anti_+sc O2* HAO2* sing 1.435 0.013 Cpro_riboseC2endo_O3H_O5P_anti_+sc C3* O3* sing 1.4216 0.0072 Cpro_riboseC2endo_O3H_O5P_anti_+sc C5* C4* sing 1.5106 0.0103 Cpro_riboseC2endo_O3H_O5P_anti_+sc C5* O5* sing 1.4403 0.0086 Cpro_riboseC2endo_O3H_O5P_anti_+sc C5* HA5* sing 1.516 0.008 Cpro_riboseC2endo_O3H_O5P_anti_+sc C5* HB5* sing 1.516 0.008 Cpro_riboseC2endo_O3H_O5P_anti_+sc P O1P doub 1.485 0.017 Cpro_riboseC2endo_O3H_O5P_anti_+sc P O2P sing 1.485 0.017 Cpro_riboseC2endo_O3H_O5P_anti_+sc P O sing 1.485 0.017 # loop_ _chem_link_bond.link_id _chem_link_bond.atom_id_1 _chem_link_bond.atom_id_2 _chem_link_bond.atom_1_comp_id _chem_link_bond.atom_2_comp_id _chem_link_bond.value_order _chem_link_bond.value_dist _chem_link_bond.value_dist_esd ribose_pyrimidine C1* N1 1 2 sing 1.3903 0.0261 ribose_O5_PO4 P O5* 2 1 sing 1.593 0.010 # loop_ _chem_comp_angle.comp_id _chem_comp_angle.atom_id_1 _chem_comp_angle.atom_id_2 _chem_comp_angle.atom_id_3 _chem_comp_angle.value_angle _chem_comp_angle.value_angle_esd _chem_comp_angle.value_dist _chem_comp_angle.value_dist_esd Cpro_riboseC2endo_O3H_O5P_anti_+sc C6 N1 C2 121.38 0.82 2.40 0.02 Cpro_riboseC2endo_O3H_O5P_anti_+sc N1 C2 N3 115.77 1.99 2.33 0.02 Cpro_riboseC2endo_O3H_O5P_anti_+sc C2 N3 C4 124.27 2.11 2.41 0.04 Cpro_riboseC2endo_O3H_O5P_anti_+sc N3 C4 C5 118.03 1.57 2.37 0.02 Cpro_riboseC2endo_O3H_O5P_anti_+sc C4 C5 C6 118.65 0.86 2.37 0.01 Cpro_riboseC2endo_O3H_O5P_anti_+sc C5 C6 N1 121.81 0.84 2.37 0.02 Cpro_riboseC2endo_O3H_O5P_anti_+sc N1 C2 O2 122.57 1.72 2.28 0.01 Cpro_riboseC2endo_O3H_O5P_anti_+sc N3 C2 O2 121.64 0.79 2.26 0.01 Cpro_riboseC2endo_O3H_O5P_anti_+sc N3 C4 N4 119.01 0.99 2.30 0.01 Cpro_riboseC2endo_O3H_O5P_anti_+sc C5 C4 N4 122.95 1.23 2.40 0.01 Cpro_riboseC2endo_O3H_O5P_anti_+sc C1* C2* C3* 101.27 0.95 2.36 0.02 Cpro_riboseC2endo_O3H_O5P_anti_+sc C2* C3* C4* 102.50 0.75 2.38 0.02 Cpro_riboseC2endo_O3H_O5P_anti_+sc C3* C4* O4* 106.07 0.61 2.38 0.01 Cpro_riboseC2endo_O3H_O5P_anti_+sc C4* O4* C1* 109.60 0.69 2.34 0.01 Cpro_riboseC2endo_O3H_O5P_anti_+sc O4* C1* C2* 105.67 0.83 2.34 0.02 Cpro_riboseC2endo_O3H_O5P_anti_+sc C1* C2* O2* 112.23 2.08 2.44 0.03 Cpro_riboseC2endo_O3H_O5P_anti_+sc C3* C2* O2* 114.61 1.81 2.47 0.02 Cpro_riboseC2endo_O3H_O5P_anti_+sc C2* C3* O3* 109.34 2.28 2.41 0.03 Cpro_riboseC2endo_O3H_O5P_anti_+sc C4* C3* O3* 109.56 1.96 2.41 0.03 Cpro_riboseC2endo_O3H_O5P_anti_+sc C5* C4* C3* 115.27 1.39 2.56 0.02 Cpro_riboseC2endo_O3H_O5P_anti_+sc C5* C4* O4* 109.16 1.17 2.42 0.02 Cpro_riboseC2endo_O3H_O5P_anti_+sc O5* C5* C4* 111.20 1.95 2.42 0.03 Cpro_riboseC2endo_O3H_O5P_anti_+sc O1P P O2P 119.6 1.5 . . Cpro_riboseC2endo_O3H_O5P_anti_+sc O1P P O 108.3 3.2 . . Cpro_riboseC2endo_O3H_O5P_anti_+sc O2P P O 107.3 3.2 . . # loop_ _chem_link_angle.link_id _chem_link_angle.atom_id_1 _chem_link_angle.atom_id_2 _chem_link_angle.atom_id_3 _chem_link_angle.atom_1_comp_id _chem_link_angle.atom_2_comp_id _chem_link_angle.atom_3_comp_id _chem_link_angle.value_angle _chem_link_angle.value_angle_esd _chem_link_angle.value_dist _chem_link_angle.value_dist_esd ribose_pyrimidine N1 C1* O4* 2 1 1 108.35 0.84 2.3300 0.0100 ribose_pyrimidine N1 C1* C2* 2 1 1 115.33 2.12 2.5200 0.0200 ribose_pyrimidine C2 N1 C1* 2 2 1 118.88 1.17 2.4500 0.0200 ribose_pyrimidine C6 N1 C1* 2 2 1 119.83 0.89 2.4700 0.0200 ribose_O5_PO4 P O5* C5* 2 1 1 120.9 1.6 . . ribose_O5_PO4 O1P P O5* 2 2 1 110.7 1.2 . . ribose_O5_PO4 O2P P O5* 2 2 1 110.7 1.2 . . ribose_O5_PO4 O P O5* 2 2 1 104.0 1.9 . . # loop_ _chem_comp_tor.comp_id _chem_comp_tor.id _chem_comp_tor.atom_id_1 _chem_comp_tor.atom_id_2 _chem_comp_tor.atom_id_3 _chem_comp_tor.atom_id_4 Cpro_riboseC2endo_O3H_O5P_anti_+sc N1-C2-N3-C4 N1 C2 N3 C4 Cpro_riboseC2endo_O3H_O5P_anti_+sc C2-N3-C4-C5 C2 N3 C4 C5 Cpro_riboseC2endo_O3H_O5P_anti_+sc N3-C4-C5-C6 N3 C4 C5 C6 Cpro_riboseC2endo_O3H_O5P_anti_+sc C4-C5-C6-N1 C4 C5 C6 N1 Cpro_riboseC2endo_O3H_O5P_anti_+sc C5-C6-N1-C2 C5 C6 N1 C2 Cpro_riboseC2endo_O3H_O5P_anti_+sc C6-N1-C2-N3 C6 N1 C2 N3 Cpro_riboseC2endo_O3H_O5P_anti_+sc C6-N1-C2-O2 C6 N1 C2 O2 Cpro_riboseC2endo_O3H_O5P_anti_+sc C4-N3-C2-O2 C4 N3 C2 O2 Cpro_riboseC2endo_O3H_O5P_anti_+sc C2-N3-C4-N4 C2 N3 C4 N4 Cpro_riboseC2endo_O3H_O5P_anti_+sc C6-C5-C4-N4 C6 C5 C4 N4 Cpro_riboseC2endo_O3H_O5P_anti_+sc C4*-O4*-C1*-C2* C4* O4* C1* C2* Cpro_riboseC2endo_O3H_O5P_anti_+sc O4*-C1*-C2*-C3* O4* C1* C2* C3* Cpro_riboseC2endo_O3H_O5P_anti_+sc C1*-C2*-C3*-C4* C1* C2* C3* C4* Cpro_riboseC2endo_O3H_O5P_anti_+sc C2*-C3*-C4*-O4* C2* C3* C4* O4* Cpro_riboseC2endo_O3H_O5P_anti_+sc C3*-C4*-O4*-C1* C3* C4* O4* C1* Cpro_riboseC2endo_O3H_O5P_anti_+sc C2*-C3*-C4*-C5* C2* C3* C4* C5* Cpro_riboseC2endo_O3H_O5P_anti_+sc C3*-C4*-C5*-O5* C3* C4* C5* O5* Cpro_riboseC2endo_O3H_O5P_anti_+sc O3*-C3*-C4*-C5* O3* C3* C4* C5* Cpro_riboseC2endo_O3H_O5P_anti_+sc O4*-C4*-C3*-O3* O4* C4* C3* O3* Cpro_riboseC2endo_O3H_O5P_anti_+sc O4*-C4*-C5*-O5* O4* C4* C5* O5* Cpro_riboseC2endo_O3H_O5P_anti_+sc C5*-C4*-O4*-C1* C5* C4* O4* C1* Cpro_riboseC2endo_O3H_O5P_anti_+sc C1*-C2*-C3*-O3* C1* C2* C3* O3* Cpro_riboseC2endo_O3H_O5P_anti_+sc O3*-C3*-C2*-O2* O3* C3* C2* O2* # _chem_link_tor.link_id ribose_pyrimidine _chem_link_tor.id chi_anti_C2endo_pyrimidine _chem_link_tor.atom_id_1 O4* _chem_link_tor.atom_id_2 C1* _chem_link_tor.atom_id_3 N1 _chem_link_tor.atom_id_4 C2 _chem_link_tor.atom_1_comp_id 1 _chem_link_tor.atom_2_comp_id 1 _chem_link_tor.atom_3_comp_id 2 _chem_link_tor.atom_4_comp_id 2 # loop_ _chem_comp_tor_value.comp_id _chem_comp_tor_value.tor_id _chem_comp_tor_value.angle _chem_comp_tor_value.angle_esd _chem_comp_tor_value.dist _chem_comp_tor_value.dist_esd Cpro_riboseC2endo_O3H_O5P_anti_+sc N1-C2-N3-C4 1.42 2.24 2.74 0.02 Cpro_riboseC2endo_O3H_O5P_anti_+sc C2-N3-C4-C5 358.63 2.10 2.79 0.03 Cpro_riboseC2endo_O3H_O5P_anti_+sc N3-C4-C5-C6 0.80 2.11 2.69 0.03 Cpro_riboseC2endo_O3H_O5P_anti_+sc C4-C5-C6-N1 359.60 1.10 2.74 0.02 Cpro_riboseC2endo_O3H_O5P_anti_+sc C5-C6-N1-C2 0.48 1.66 2.79 0.03 Cpro_riboseC2endo_O3H_O5P_anti_+sc C6-N1-C2-N3 359.07 2.58 2.69 0.03 Cpro_riboseC2endo_O3H_O5P_anti_+sc C6-N1-C2-O2 178.69 2.43 3.51 0.01 Cpro_riboseC2endo_O3H_O5P_anti_+sc C4-N3-C2-O2 181.78 2.33 3.51 0.02 Cpro_riboseC2endo_O3H_O5P_anti_+sc C2-N3-C4-N4 178.99 2.06 3.59 0.03 Cpro_riboseC2endo_O3H_O5P_anti_+sc C6-C5-C4-N4 180.44 2.01 3.59 0.01 Cpro_riboseC2endo_O3H_O5P_anti_+sc C4*-O4*-C1*-C2* 338.59 5.62 2.38 0.02 Cpro_riboseC2endo_O3H_O5P_anti_+sc O4*-C1*-C2*-C3* 35.91 3.42 2.38 0.01 Cpro_riboseC2endo_O3H_O5P_anti_+sc C1*-C2*-C3*-C4* 324.07 2.42 2.34 0.01 Cpro_riboseC2endo_O3H_O5P_anti_+sc C2*-C3*-C4*-O4* 24.52 4.40 2.34 0.02 Cpro_riboseC2endo_O3H_O5P_anti_+sc C3*-C4*-O4*-C1* 357.83 6.08 2.36 0.02 Cpro_riboseC2endo_O3H_O5P_anti_+sc C2*-C3*-C4*-C5* 263.59 4.21 3.28 0.06 Cpro_riboseC2endo_O3H_O5P_anti_+sc C3*-C4*-C5*-O5* 52.19 4.95 2.93 0.07 Cpro_riboseC2endo_O3H_O5P_anti_+sc O3*-C3*-C4*-C5* 147.56 4.89 3.71 0.04 Cpro_riboseC2endo_O3H_O5P_anti_+sc O4*-C4*-C3*-O3* 268.49 5.15 3.10 0.06 Cpro_riboseC2endo_O3H_O5P_anti_+sc O4*-C4*-C5*-O5* 293.22 4.75 2.91 0.07 Cpro_riboseC2endo_O3H_O5P_anti_+sc C5*-C4*-O4*-C1* 122.63 6.13 3.42 0.05 Cpro_riboseC2endo_O3H_O5P_anti_+sc C1*-C2*-C3*-O3* 80.26 3.14 2.94 0.06 Cpro_riboseC2endo_O3H_O5P_anti_+sc O3*-C3*-C2*-O2* 319.19 3.93 2.74 0.05 # _chem_link_tor_value.link_id ribose_pyrimidine _chem_link_tor_value.tor_id chi_anti_C2endo_pyrimidine _chem_link_tor_value.angle 237.0 _chem_link_tor_value.angle_esd 24.3 _chem_link_tor_value.dist . _chem_link_tor_value.dist_esd . # loop_ _ndb_chem_comp_bond.comp_id _ndb_chem_comp_bond.atom_id_1 _ndb_chem_comp_bond.atom_id_2 _ndb_chem_comp_bond.csd_bond_order _ndb_chem_comp_bond.dbsearch_id _ndb_chem_comp_bond.value_dist_calc _ndb_chem_comp_bond.value_dist _ndb_chem_comp_bond.value_dist_delta Cpro_riboseC2endo_O3H_O5P_anti_+sc N1 C2 '1,2,5 ' cyt_pro 1.3804 1.3798 -0.0006 Cpro_riboseC2endo_O3H_O5P_anti_+sc C2 N3 '1,2,5 ' cyt_pro 1.3752 1.3755 0.0003 Cpro_riboseC2endo_O3H_O5P_anti_+sc N3 C4 '1,2,5 ' cyt_pro 1.3513 1.3515 0.0002 Cpro_riboseC2endo_O3H_O5P_anti_+sc C4 C5 '1,2,5 ' cyt_pro 1.4130 1.4131 0.0001 Cpro_riboseC2endo_O3H_O5P_anti_+sc C5 C6 '1,2,5 ' cyt_pro 1.3402 1.3401 -0.0001 Cpro_riboseC2endo_O3H_O5P_anti_+sc C6 N1 '1,2,5 ' cyt_pro 1.3677 1.3673 -0.0004 Cpro_riboseC2endo_O3H_O5P_anti_+sc C2 O2 '1,2,5 ' cyt_pro 1.2171 1.2171 0.0000 Cpro_riboseC2endo_O3H_O5P_anti_+sc C4 N4 '1,2,5 ' cyt_pro 1.3140 1.3140 0.0000 Cpro_riboseC2endo_O3H_O5P_anti_+sc N4 H4A 1 cyt_pro . . . Cpro_riboseC2endo_O3H_O5P_anti_+sc N4 H4B 1 cyt_pro . . . Cpro_riboseC2endo_O3H_O5P_anti_+sc C5 H5 1 cyt_pro . . . Cpro_riboseC2endo_O3H_O5P_anti_+sc C6 H6 1 cyt_pro . . . Cpro_riboseC2endo_O3H_O5P_anti_+sc C1* C2* 1 ribose 1.5254 1.5260 0.0006 Cpro_riboseC2endo_O3H_O5P_anti_+sc C1* HA1* 1 ribose . . . Cpro_riboseC2endo_O3H_O5P_anti_+sc C2* C3* 1 ribose 1.5253 1.5255 0.0002 Cpro_riboseC2endo_O3H_O5P_anti_+sc C2* HA2* 1 ribose . . . Cpro_riboseC2endo_O3H_O5P_anti_+sc C3* C4* 1 ribose 1.5249 1.5246 -0.0003 Cpro_riboseC2endo_O3H_O5P_anti_+sc C3* HA3* 1 ribose . . . Cpro_riboseC2endo_O3H_O5P_anti_+sc C4* O4* 1 ribose 1.4541 1.4539 -0.0002 Cpro_riboseC2endo_O3H_O5P_anti_+sc C4* HA4* 1 ribose . . . Cpro_riboseC2endo_O3H_O5P_anti_+sc O4* C1* 1 ribose 1.4137 1.4135 -0.0002 Cpro_riboseC2endo_O3H_O5P_anti_+sc C2* O2* 1 ribose 1.4112 1.4113 0.0001 Cpro_riboseC2endo_O3H_O5P_anti_+sc C2* HAO2* 1 ribose . . . Cpro_riboseC2endo_O3H_O5P_anti_+sc C3* O3* '1 A' ribose_C2endo_O3H 1.4216 1.4216 0.0000 Cpro_riboseC2endo_O3H_O5P_anti_+sc C5* C4* 1 ribose 1.5105 1.5106 0.0001 Cpro_riboseC2endo_O3H_O5P_anti_+sc C5* O5* '1 A' ribose_C2endo_O5P 1.4403 1.4403 0.0000 Cpro_riboseC2endo_O3H_O5P_anti_+sc C5* HA5* 1 ribose . . . Cpro_riboseC2endo_O3H_O5P_anti_+sc C5* HB5* 1 ribose . . . Cpro_riboseC2endo_O3H_O5P_anti_+sc P O1P 1 PO4_1 1.4851 1.4850 -0.0001 Cpro_riboseC2endo_O3H_O5P_anti_+sc P O2P 1 PO4_1 1.4851 1.4850 -0.0001 Cpro_riboseC2endo_O3H_O5P_anti_+sc P O 1 PO4_1 1.4850 1.4850 0.0000 # loop_ _ndb_chem_link_bond.link_id _ndb_chem_link_bond.dbsearch_id _ndb_chem_link_bond.atom_id_1 _ndb_chem_link_bond.atom_id_2 _ndb_chem_link_bond.atom_1_comp_id _ndb_chem_link_bond.atom_2_comp_id _ndb_chem_link_bond.value_dist_calc _ndb_chem_link_bond.value_dist _ndb_chem_link_bond.value_dist_delta ribose_pyrimidine ribose_C2endo_pyrimidine C1* N1 1 2 1.3901 1.3903 0.0002 ribose_O5_PO4 phosphate_O5_1 P O5* 2 1 1.5930 1.5930 0.0000 # loop_ _ndb_chem_comp_angle.comp_id _ndb_chem_comp_angle.atom_id_1 _ndb_chem_comp_angle.atom_id_2 _ndb_chem_comp_angle.atom_id_3 _ndb_chem_comp_angle.dbsearch_id _ndb_chem_comp_angle.value_angle_calc _ndb_chem_comp_angle.value_angle _ndb_chem_comp_angle.value_angle_delta Cpro_riboseC2endo_O3H_O5P_anti_+sc C6 N1 C2 cyt_pro 121.08 121.38 0.30 Cpro_riboseC2endo_O3H_O5P_anti_+sc N1 C2 N3 cyt_pro 116.04 115.77 -0.27 Cpro_riboseC2endo_O3H_O5P_anti_+sc C2 N3 C4 cyt_pro 124.23 124.27 0.04 Cpro_riboseC2endo_O3H_O5P_anti_+sc N3 C4 C5 cyt_pro 117.98 118.03 0.05 Cpro_riboseC2endo_O3H_O5P_anti_+sc C4 C5 C6 cyt_pro 118.71 118.65 -0.06 Cpro_riboseC2endo_O3H_O5P_anti_+sc C5 C6 N1 cyt_pro 121.96 121.81 -0.15 Cpro_riboseC2endo_O3H_O5P_anti_+sc N1 C2 O2 cyt_pro 122.37 122.57 0.20 Cpro_riboseC2endo_O3H_O5P_anti_+sc N3 C2 O2 cyt_pro 121.59 121.64 0.05 Cpro_riboseC2endo_O3H_O5P_anti_+sc N3 C4 N4 cyt_pro 119.04 119.01 -0.03 Cpro_riboseC2endo_O3H_O5P_anti_+sc C5 C4 N4 cyt_pro 122.98 122.95 -0.03 Cpro_riboseC2endo_O3H_O5P_anti_+sc C1* C2* C3* ribose 101.25 101.27 0.02 Cpro_riboseC2endo_O3H_O5P_anti_+sc C2* C3* C4* ribose 102.55 102.50 -0.05 Cpro_riboseC2endo_O3H_O5P_anti_+sc C3* C4* O4* ribose 106.14 106.07 -0.07 Cpro_riboseC2endo_O3H_O5P_anti_+sc C4* O4* C1* ribose 109.68 109.60 -0.08 Cpro_riboseC2endo_O3H_O5P_anti_+sc O4* C1* C2* ribose 105.67 105.67 0.00 Cpro_riboseC2endo_O3H_O5P_anti_+sc C1* C2* O2* ribose 112.22 112.23 0.01 Cpro_riboseC2endo_O3H_O5P_anti_+sc C3* C2* O2* ribose 114.61 114.61 0.00 Cpro_riboseC2endo_O3H_O5P_anti_+sc C2* C3* O3* ribose 109.32 109.34 0.02 Cpro_riboseC2endo_O3H_O5P_anti_+sc C4* C3* O3* ribose 109.62 109.56 -0.06 Cpro_riboseC2endo_O3H_O5P_anti_+sc C5* C4* C3* ribose 115.24 115.27 0.03 Cpro_riboseC2endo_O3H_O5P_anti_+sc C5* C4* O4* ribose 109.15 109.16 0.01 Cpro_riboseC2endo_O3H_O5P_anti_+sc O5* C5* C4* ribose 111.15 111.20 0.05 Cpro_riboseC2endo_O3H_O5P_anti_+sc O1P P O2P PO4_1 119.13 119.60 0.47 Cpro_riboseC2endo_O3H_O5P_anti_+sc O1P P O PO4_1 106.55 108.30 1.75 Cpro_riboseC2endo_O3H_O5P_anti_+sc O2P P O PO4_1 105.47 107.30 1.83 # loop_ _ndb_chem_link_angle.link_id _ndb_chem_link_angle.dbsearch_id _ndb_chem_link_angle.atom_id_1 _ndb_chem_link_angle.atom_id_2 _ndb_chem_link_angle.atom_id_3 _ndb_chem_link_angle.atom_1_comp_id _ndb_chem_link_angle.atom_2_comp_id _ndb_chem_link_angle.atom_3_comp_id _ndb_chem_link_angle.value_angle_calc _ndb_chem_link_angle.value_angle _ndb_chem_link_angle.value_angle_delta ribose_pyrimidine ribose_C2endo_pyrimidine N1 C1* O4* 2 1 1 108.2742 108.3500 0.0758 ribose_pyrimidine ribose_C2endo_pyrimidine N1 C1* C2* 2 1 1 114.7935 115.3300 0.5365 ribose_pyrimidine ribose_C2endo_pyrimidine C2 N1 C1* 2 2 1 117.9226 118.8800 0.9574 ribose_pyrimidine ribose_C2endo_pyrimidine C6 N1 C1* 2 2 1 119.2627 119.8300 0.5673 ribose_O5_PO4 phosphate_O5_1 P O5* C5* 1 1 2 120.8817 120.9000 0.0183 ribose_O5_PO4 phosphate_O5_1 O5* P O1P 2 2 1 110.4177 110.7000 0.2823 ribose_O5_PO4 phosphate_O5_1 O5* P O2P 2 2 1 110.4346 110.7000 0.2654 ribose_O5_PO4 phosphate_O5_1 O P O5* 2 2 1 103.4656 104.0000 0.5344 # loop_ _ndb_chem_comp_tor.comp_id _ndb_chem_comp_tor.id _ndb_chem_comp_tor.dbsearch_id _ndb_chem_comp_tor.value_angle_calc _ndb_chem_comp_tor.value_angle _ndb_chem_comp_tor.value_angle_delta Cpro_riboseC2endo_O3H_O5P_anti_+sc N1-C2-N3-C4 cyt_pro 1.51 1.42 -0.09 Cpro_riboseC2endo_O3H_O5P_anti_+sc C2-N3-C4-C5 cyt_pro 358.67 358.63 -0.04 Cpro_riboseC2endo_O3H_O5P_anti_+sc N3-C4-C5-C6 cyt_pro 0.72 0.80 0.08 Cpro_riboseC2endo_O3H_O5P_anti_+sc C4-C5-C6-N1 cyt_pro 359.59 359.60 0.01 Cpro_riboseC2endo_O3H_O5P_anti_+sc C5-C6-N1-C2 cyt_pro 0.63 0.48 -0.15 Cpro_riboseC2endo_O3H_O5P_anti_+sc C6-N1-C2-N3 cyt_pro 358.89 359.07 0.18 Cpro_riboseC2endo_O3H_O5P_anti_+sc C6-N1-C2-O2 cyt_pro 178.64 178.69 0.05 Cpro_riboseC2endo_O3H_O5P_anti_+sc C4-N3-C2-O2 cyt_pro 181.76 181.78 0.02 Cpro_riboseC2endo_O3H_O5P_anti_+sc C2-N3-C4-N4 cyt_pro 178.98 178.99 0.01 Cpro_riboseC2endo_O3H_O5P_anti_+sc C6-C5-C4-N4 cyt_pro 180.40 180.44 0.04 Cpro_riboseC2endo_O3H_O5P_anti_+sc C4*-O4*-C1*-C2* ribose 338.07 338.59 0.52 Cpro_riboseC2endo_O3H_O5P_anti_+sc O4*-C1*-C2*-C3* ribose 36.36 35.91 -0.45 Cpro_riboseC2endo_O3H_O5P_anti_+sc C1*-C2*-C3*-C4* ribose 323.86 324.07 0.21 Cpro_riboseC2endo_O3H_O5P_anti_+sc C2*-C3*-C4*-O4* ribose 24.44 24.52 0.08 Cpro_riboseC2endo_O3H_O5P_anti_+sc C3*-C4*-O4*-C1* ribose 358.22 357.83 -0.39 Cpro_riboseC2endo_O3H_O5P_anti_+sc C2*-C3*-C4*-C5* ribose 263.51 263.59 0.08 Cpro_riboseC2endo_O3H_O5P_anti_+sc C3*-C4*-C5*-O5* all_ribose_gamma 52.30 52.19 -0.11 Cpro_riboseC2endo_O3H_O5P_anti_+sc O3*-C3*-C4*-C5* ribose 147.46 147.56 0.10 Cpro_riboseC2endo_O3H_O5P_anti_+sc O4*-C4*-C3*-O3* ribose 268.39 268.49 0.10 Cpro_riboseC2endo_O3H_O5P_anti_+sc O4*-C4*-C5*-O5* all_ribose_gamma 293.03 293.22 0.19 Cpro_riboseC2endo_O3H_O5P_anti_+sc C5*-C4*-O4*-C1* ribose 122.99 122.63 -0.36 Cpro_riboseC2endo_O3H_O5P_anti_+sc C1*-C2*-C3*-O3* ribose 80.12 80.26 0.14 Cpro_riboseC2endo_O3H_O5P_anti_+sc O3*-C3*-C2*-O2* ribose 319.11 319.19 0.08 # _ndb_chem_link_tor.link_id ribose_pyrimidine _ndb_chem_link_tor.id chi_anti_C2endo_pyrimidine _ndb_chem_link_tor.dbsearch_id C2endo_pyrimidine_anti _ndb_chem_link_tor.value_angle_calc 237.01 _ndb_chem_link_tor.value_angle 237.00 _ndb_chem_link_tor.value_angle_delta -0.01 # loop_ _ndb_dbitem.id _ndb_dbitem.dbsearch_id _ndb_dbitem.molecule_id _ndb_dbitem.r_factor _ndb_dbitem.sigma _ndb_dbitem.compound _ndb_dbitem.citation aracyp cyt_pro 1 3.40 0.001-0.005A ;ARABINOSYL-CYTIDINE-2',5'-CYCLIC PHOSPHATE ; 'W.KUNG,R.E.MARSH,M.KAINOSHO 1977, J.AM.CHEM.SOC., 99, 5471' arfcyt10 cyt_pro 1 2.20 0.001-0.005A '1-(BETA-D-ARABINOFURANOSYL)CYTOSINE HYDROCHLORIDE (ABSOLUTE CONFIGURATION)' 'J.S.SHERFINSKI,R.E.MARSH 1973, ACTA CRYSTALLOGR.,SECT.B, 29, 192' bzcytn cyt_pro 1 4.60 0.001-0.005A '1-BENZYLCYTOSINE NITRATE' ;M.ROSSI,J.P.CARADONNA,L.G.MARZILLI,T.J.KISTENMACHER 1979, ADV.MOL.RELAX.INT.PROC., 15, 103 ; cyticl cyt_pro 1 2.80 0.001-0.005A 'CYTIDINIUM CHLORIDE' 'A.MOSSET,J.J.BONNET,J.GALY 1979, ACTA CRYSTALLOGR.,SECT.B, 35, 1908' cytidn cyt_pro 1 2.60 0.006-0.010A 'CYTIDINIUM NITRATE' ;J.J.GUY,L.R.NASSIMBENI,G.M.SHELDRICK,R.TAYLOR 1976, ACTA CRYSTALLOGR.,SECT.B, 32, 2909 ; dinyii10 cyt_pro 1 4.10 0.006-0.010A ;SODIUM BIS(DEOXYCYTIDYLYL-(3'-5')-DEOXYGUANOSINE) DINUCLEOTIDE HEPTAHYDRATE ; 'M.COLL,X.SOLANS,M.FONT-ALTABA,J.A.SUBIRANA 1987, J.BIOMOL.STRUCT.DYN., 4, 797' dinyii10 cyt_pro 2 4.10 0.006-0.010A ;SODIUM BIS(DEOXYCYTIDYLYL-(3'-5')-DEOXYGUANOSINE) DINUCLEOTIDE HEPTAHYDRATE ; 'M.COLL,X.SOLANS,M.FONT-ALTABA,J.A.SUBIRANA 1987, J.BIOMOL.STRUCT.DYN., 4, 797' docytc cyt_pro 1 3.50 0.001-0.005A ;2'-DEOXYCYTIDINE HYDROCHLORIDE (ABSOLUTE CONFIGURATION) ; 'E.SUBRAMANIAN,D.J.HUNT 1970, ACTA CRYSTALLOGR.,SECT.B, 26, 303' jibdih cyt_pro 1 3.00 0.001-0.005A ;2'-DEOXYCYTIDINIUM DIHYDROGENPHOSPHATE ; 'M.JASKOLSKI 1991, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 47, 153' kogbox cyt_pro 1 3.10 0.001-0.005A ;2'-DEOXY-2'-METHYLIDENECYTIDINE HYDROCHLORIDE (POTENT ANTICANCER ACTIVITY IN CULTURE AND IN TUMOUR-BEARING MICE) ; ;TAI-SHUN LIN,MEI-ZHEN LUO,MAO-CHIN LIU,R.H.CLARKE-KATZENBURG,YUNG-CHI CHENG,W.H.PRUSOFF,W.R.MANCINI,G.I.BIRNBAUM,E.J.GABE,J.GIZIEWICZ 1991, J.MED.CHEM., 34, 2607 ; kogbox01 cyt_pro 1 4.50 0.006-0.010A ;2'-DEOXY-2'-METHYLIDENECYTIDINIUM CHLORIDE (POTENT INHIBITORY AGENT OF THE GROWTH OF TUMOUR CELLS) ; ;Y.YAMAGATA,K.TOMITA,N.MARUBAYASHI,I.UEDA,S.SAKATA,A.MATSUDA,K.TAKENUKI,T.UEDA 1992, NUCLEOSIDES AND NUCLEOTIDES, 11, 835 ; mectsi cyt_pro 1 4.50 0.001-0.005A 'BIS(1-METHYLCYTOSINE) BIS(1-METHYLCYTOSINIUM) HEXAFLUOROSILICATE DIHYDRATE' ;T.J.KISTENMACHER,M.ROSSI,C.C.CHIANG,J.P.CARADONNA,L.G.MARZILLI 1980, ADV.MOL.RELAX.INT.PROC., 17, 113 ; mectsi cyt_pro 2 4.50 0.001-0.005A 'BIS(1-METHYLCYTOSINE) BIS(1-METHYLCYTOSINIUM) HEXAFLUOROSILICATE DIHYDRATE' ;T.J.KISTENMACHER,M.ROSSI,C.C.CHIANG,J.P.CARADONNA,L.G.MARZILLI 1980, ADV.MOL.RELAX.INT.PROC., 17, 113 ; poggat cyt_pro 1 4.20 0.006-0.010A ;BIS(2'-DEOXYCYTIDINE) DIHYDROGEN PHOSPHATE ; ;M.JASKOLSKI,M.GDANIEC,M.GILSKI,M.ALEJSKA,M.D.BRATEK-WIEWIOROWSKA 1994, J.BIOMOL.STRUCT.DYN., 11, 1287 ; poggat cyt_pro 2 4.20 0.006-0.010A ;BIS(2'-DEOXYCYTIDINE) DIHYDROGEN PHOSPHATE ; ;M.JASKOLSKI,M.GDANIEC,M.GILSKI,M.ALEJSKA,M.D.BRATEK-WIEWIOROWSKA 1994, J.BIOMOL.STRUCT.DYN., 11, 1287 ; poggat cyt_pro 3 4.20 0.006-0.010A ;BIS(2'-DEOXYCYTIDINE) DIHYDROGEN PHOSPHATE ; ;M.JASKOLSKI,M.GDANIEC,M.GILSKI,M.ALEJSKA,M.D.BRATEK-WIEWIOROWSKA 1994, J.BIOMOL.STRUCT.DYN., 11, 1287 ; poggat cyt_pro 4 4.20 0.006-0.010A ;BIS(2'-DEOXYCYTIDINE) DIHYDROGEN PHOSPHATE ; ;M.JASKOLSKI,M.GDANIEC,M.GILSKI,M.ALEJSKA,M.D.BRATEK-WIEWIOROWSKA 1994, J.BIOMOL.STRUCT.DYN., 11, 1287 ; vuymad cyt_pro 1 2.90 0.001-0.005A 'CYTIDINIUM DIHYDROGENPHOSPHATE' 'M.JASKOLSKI 1989, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 45, 85' xfurcc10 cyt_pro 1 3.40 0.001-0.005A '1-ALPHA-D-XYLOFURANOSYL-CYTOSINE HYDROCHLORIDE' 'M.L.POST,C.P.HUBER,G.I.BIRNBAUM,D.SHUGAR 1981, CAN.J.CHEM., 59, 238' yidkif cyt_pro 1 2.97 0.001-0.005A 'BIS(CYTIDINIUM) SULFATE' 'M.GILSKI,M.JASKOLSKI 1993, POL.J.CHEM., 67, 1841' yidkif cyt_pro 2 2.97 0.001-0.005A 'BIS(CYTIDINIUM) SULFATE' 'M.GILSKI,M.JASKOLSKI 1993, POL.J.CHEM., 67, 1841' acados ribose 1 4.10 0.006-0.010A '3'-O-ACETYLADENOSINE' 'S.T.RAO,M.SUNDARALINGAM 1970, J.AM.CHEM.SOC., 92, 4963' adoshc ribose 1 3.70 0.001-0.005A 'ADENOSINE HYDROCHLORIDE' 'K.SHIKATA,T.UEKI,T.MITSUI 1973, ACTA CRYSTALLOGR.,SECT.B, 29, 31' amurid ribose 1 7.60 0.006-0.010A 5-AMINOURIDINE 'E.EGERT,H.J.LINDNER,W.HILLEN,H.G.GASSEN 1978, ACTA CRYSTALLOGR.,SECT.B, 34, 2204' barfup ribose 1 4.90 0.006-0.010A 6-BENZYLAMINO-9-BETA-D-RIBOFURANOSYLPURINE 'T.TAKEDA,Y.OHASHI,Y.SASADA,M.KAKUDO 1976, ACTA CRYSTALLOGR.,SECT.B, 32, 614' bibxit ribose 1 5.10 0.006-0.010A '4-AMINO-1-BETA-D-RIBOFURANOSYL-PYRIMIDINE-2,6(1H,3H)-DIONE MONOHYDRATE' 'J.GORSKI,P.TOLLIN 1982, CRYST.STRUCT.COMMUN., 11, 543' bimfei10 ribose 1 3.70 0.001-0.005A 1,N-6--ETHENOADENOSINE 'M.JASKOLSKI 1982, ACTA CRYSTALLOGR.,SECT.B, 38, 3171' bimfim10 ribose 1 4.50 0.001-0.005A '1,N-6--ETHENOADENOSINE HYDROCHLORIDE' 'M.JASKOLSKI 1984, J.CRYSTALLOGR.SPECTROSC.RES., 14, 45' cekluz ribose 1 4.90 0.001-0.005A 'DISODIUM URIDINE DIPHOSPHOGLUCOSE DIHYDRATE' 'Y.SUGAWARA,H.IWASAKI 1984, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 40, 389' clurid10 ribose 1 3.15 0.001-0.005A 5-CHLOROURIDINE 'S.W.HAWKINSON,C.L.COULTER 1971, ACTA CRYSTALLOGR.,SECT.B, 27, 34' coczid ribose 1 3.90 0.001-0.005A 'ADENOSINE-5'-O-DIETHYL-PHOSPHATE' 'R.G.BRENNAN,N.S.KONDO,M.SUNDARALINGAM 1984, J.AM.CHEM.SOC., 106, 5671' coxnei ribose 1 3.10 0.001-0.005A '8-CHLORO-GUANOSINE DIHYDRATE' 'G.I.BIRNBAUM,P.LASSOTA,D.SHUGAR 1984, BIOCHEMISTRY, 23, 5048' cutvao ribose 1 3.90 0.001-0.005A XANTHOSINE 'B.LESYNG,C.MARCK,W.SAENGER 1984, Z.NATURFORSCH.,TEIL C, 39, 720' cytiac01 ribose 1 7.30 0.006-0.010A ;CYTIDINE-3'-PHOSPHATE (MONOCLINIC FORM) CYTIDYLIC ACID B ; 'C.E.BUGG,R.E.MARSH 1967, J.MOL.BIOL., 25, 67' cyticl ribose 1 2.80 0.001-0.005A 'CYTIDINIUM CHLORIDE' 'A.MOSSET,J.J.BONNET,J.GALY 1979, ACTA CRYSTALLOGR.,SECT.B, 35, 1908' daurid01 ribose 1 3.95 0.001-0.005A ;3',5'-DIACETYLURIDINE (AT -170DEG.C) ; ;R.A.G.DE GRAAFF,G.ADMIRAAL,E.H.KOEN,C.ROMERS 1977, ACTA CRYSTALLOGR.,SECT.B, 33, 2459 ; demxey ribose 1 5.30 0.006-0.010A '8-METHYLGUANOSINE TRIHYDRATE' ;K.HAMADA,I.HONDA,S.FUJII,T.FUJIWARA,K.-I.TOMITA 1985, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 41, 1486 ; dmurid ribose 1 5.80 0.006-0.010A 5-DIMETHYLAMINO-URIDINE 'E.EGERT,H.J.LINDNER,W.HILLEN,H.G.GASSEN 1979, ACTA CRYSTALLOGR.,SECT.B, 35, 920' dotxuf10 ribose 1 5.70 0.001-0.005A ;TRYPTAMINIUM 7-METHYLGUANOSINE 5'-MONOPHOSPHATE TRIHYDRATE ; 'T.ISHIDA,M.DOI,H.UEDA,M.INOUE,G.M.SHELDRICK 1988, J.AM.CHEM.SOC., 110, 2286' erfimp ribose 1 4.30 0.006-0.010A '7-ETHYL-3-BETA-D-RIBOFURANOSYLIMIDAZO(2,1-I)PURINE CHLORIDE MONOHYDRATE' 'A.H.-J.WANG,L.G.DAMMANN,J.R.BARRIO,I.C.PAUL 1974, J.AM.CHEM.SOC., 96, 1205' fucwij ribose 1 4.90 0.001-0.005A 'N-6--DIDEHYDRO-1,6-DIHYDRO-1-METHYLADENOSINE TRIHYDRATE' 'Y.YAMAGATA,K.-I.TOMITA 1987, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 43, 2117' fucwij ribose 2 4.90 0.001-0.005A 'N-6--DIDEHYDRO-1,6-DIHYDRO-1-METHYLADENOSINE TRIHYDRATE' 'Y.YAMAGATA,K.-I.TOMITA 1987, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 43, 2117' gicmou ribose 1 4.10 0.001-0.005A 'N-4--AMINOCYTIDINE HEMIHYDRATE (MUTAGENIC ACTIVITY)' ;S.KASHINO,K.NEGISHI,H.HAYATSU 1988, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 44, 1454 ; gicmou ribose 2 4.10 0.001-0.005A 'N-4--AMINOCYTIDINE HEMIHYDRATE (MUTAGENIC ACTIVITY)' ;S.KASHINO,K.NEGISHI,H.HAYATSU 1988, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 44, 1454 ; guansh10 ribose 1 3.60 0.001-0.005A 'GUANOSINE DIHYDRATE' 'U.THEWALT,C.E.BUGG,R.E.MARSH 1970, ACTA CRYSTALLOGR.,SECT.B, 26, 1089' guopna10 ribose 1 5.60 0.006-0.010A ;DISODIUM GUANOSINE-5'-PHOSPHATE HEPTAHYDRATE ; 'C.L.BARNES,S.W.HAWKINSON 1982, ACTA CRYSTALLOGR.,SECT.B, 38, 812' guopna10 ribose 2 5.60 0.006-0.010A ;DISODIUM GUANOSINE-5'-PHOSPHATE HEPTAHYDRATE ; 'C.L.BARNES,S.W.HAWKINSON 1982, ACTA CRYSTALLOGR.,SECT.B, 38, 812' guopna11 ribose 1 5.70 0.006-0.010A ;DISODIUM GUANOSINE-5'-PHOSPHATE HEPTAHYDRATE ; 'S.K.KATTI,T.P.SESHADRI,M.A.VISWAMITRA 1981, ACTA CRYSTALLOGR.,SECT.B, 37, 1825' guopna11 ribose 2 5.70 0.006-0.010A ;DISODIUM GUANOSINE-5'-PHOSPHATE HEPTAHYDRATE ; 'S.K.KATTI,T.P.SESHADRI,M.A.VISWAMITRA 1981, ACTA CRYSTALLOGR.,SECT.B, 37, 1825' hipads ribose 1 3.10 0.001-0.005A '8-(ALPHA-HYDROXYISOPROPYL)-ADENOSINE DIHYDRATE' 'G.I.BIRNBAUM,D.SHUGAR 1978, BIOCHIM.BIOPHYS.ACTA, 517, 500' hxurid ribose 1 2.60 0.001-0.005A 5-HYDROXYURIDINE 'U.THEWALT,C.E.BUGG 1973, ACTA CRYSTALLOGR.,SECT.B, 29, 1393' jawjia ribose 1 2.96 0.001-0.005A '7-METHYL-8-OXO-7,8-DIHYDROGUANOSINE MONOHYDRATE' ;S.B.LARSON,H.B.COTTAM,R.K.ROBINS 1989, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 45, 1979 ; jigcux ribose 1 2.78 0.001-0.005A '2-AMINO-9-BETA-D-RIBOFURANOSYLPURINE-2-SULFONAMIDE 2-SULFAMOYLADENOSINE' 'N.B.HANNA,S.B.LARSON,R.K.ROBINS,G.R.REVANKAR 1990, J.HETEROCYCL.CHEM., 27, 1713' kehzay ribose 1 2.86 0.001-0.005A ;2-AMINO-7-METHYL-9-(BETA-D-RIBOFURANOSYL)-8(9H)-THIOXOPURIN-6(1H)-ONE MONOHYDRATE (IMMUNE SYSTEM STIMULATORY ACTION) ; ;S.B.LARSON,E.M.HENRY,G.D.KINI,R.K.ROBINS 1990, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 46, 506 ; kurdmp ribose 1 3.50 0.001-0.005A ;POTASSIUM DIHYDROURIDINE-3'-MONOPHOSPHATE HEMIHYDRATE ; 'J.EMERSON,M.SUNDARALINGAM 1980, ACTA CRYSTALLOGR.,SECT.B, 36, 537' lumzrf01 ribose 1 5.90 0.001-0.005A 6,7-DIMETHYL-N-1-BETA-D-RIBOFURANOSYL-LUMAZINE 'W.SAENGER,G.RITZMANN,W.PFLEIDERER 1977, ACTA CRYSTALLOGR.,SECT.B, 33, 2989' lumzrf01 ribose 2 5.90 0.001-0.005A 6,7-DIMETHYL-N-1-BETA-D-RIBOFURANOSYL-LUMAZINE 'W.SAENGER,G.RITZMANN,W.PFLEIDERER 1977, ACTA CRYSTALLOGR.,SECT.B, 33, 2989' mguosm ribose 1 3.06 0.001-0.005A '2-N-METHYLGUANOSINE MONOHYDRATE' 'R.A.G.DE GRAAFF,F.B.MARTENS,C.ROMERS 1978, ACTA CRYSTALLOGR.,SECT.B, 34, 3012' mguosm01 ribose 1 4.30 0.006-0.010A 'N-2--METHYL-GUANOSINE MONOHYDRATE' 'S.L.GINELL,R.PARTHASARATHY 1978, BIOCHEM.BIOPHYS.RES.COMM., 84, 886' palaur10 ribose 1 6.70 0.006-0.010A '5-(N-(L-PHENYLALANYL)AMINO)URIDINE PEPSEQ A=2 PHE-ALA*' 'H.M.BERMAN,W.C.HAMILTON,R.J.ROUSSEAU 1973, BIOCHEMISTRY, 12, 1809' pctrib10 ribose 1 4.10 0.001-0.005A N-6--(N-THREONYLCARBONYL)ADENOSINE 'R.PARTHASARATHY,J.M.OHRT,G.B.CHHEDA 1977, BIOCHEMISTRY, 16, 4999' selzis ribose 1 4.10 0.001-0.005A 3-(8-XANTHOSYL)XANTHINE 'XINHUA JI,P.SUBRAMANIAN,D.VAN DER HELM,G.DRYHURST 1990, J.ORG.CHEM., 55, 1291' selzis ribose 2 4.10 0.001-0.005A 3-(8-XANTHOSYL)XANTHINE 'XINHUA JI,P.SUBRAMANIAN,D.VAN DER HELM,G.DRYHURST 1990, J.ORG.CHEM., 55, 1291' suromm ribose 1 2.50 0.006-0.010A ;SODIUM URIDINE-5'-O-METHYLPHOSPHATE METHANOL SOLVATE ; 'J.D.HOOGENDORP,C.ROMERS 1978, ACTA CRYSTALLOGR.,SECT.B, 34, 2724' toaden ribose 1 4.80 0.006-0.010A '8-THIOXO-ADENOSINE MONOHYDRATE' ;H.MIZUNO,K.KITAMURA,A.MIYAO,Y.YAMAGATA,A.WAKAHARA,K.TOMITA,M.IKEHARA 1980, ACTA CRYSTALLOGR.,SECT.B, 36, 902 ; uridmp10 ribose 1 5.10 0.006-0.010A ;URIDINE-3'-MONOPHOSPHATE MONOHYDRATE ; 'T.SRIKRISHNAN,S.M.FRIDEY,R.PARTHASARATHY 1979, J.AM.CHEM.SOC., 101, 3739' vuymad ribose 1 2.90 0.001-0.005A 'CYTIDINIUM DIHYDROGENPHOSPHATE' 'M.JASKOLSKI 1989, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 45, 85' yidkif ribose 1 2.97 0.001-0.005A 'BIS(CYTIDINIUM) SULFATE' 'M.GILSKI,M.JASKOLSKI 1993, POL.J.CHEM., 67, 1841' yidkif ribose 2 2.97 0.001-0.005A 'BIS(CYTIDINIUM) SULFATE' 'M.GILSKI,M.JASKOLSKI 1993, POL.J.CHEM., 67, 1841' zaytic ribose 1 3.45 0.001-0.005A '3-METHYLURIDINE (ABSOLUTE CONFIGURATION BY REFINEMENT OF THE FLACK PARAMETER)' ;B.L.PARTRIDGE,C.E.PRITCHARD 1995, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 51, 1929 ; zexwee ribose 1 3.66 0.006-0.010A ;2-CHLORO-N-(1-PHENYL-2(R)-PROPYL)-9-BETA-D-RIBOFURANOSYL-9H-PURIN-6-AMINE (ACTIVATING AGENT OF ADENOSINE A2 RECEPTOR) N-(1-PHENYL-2(R)-PROPYL)-2-CHLORO-ADENOSINE ; 'A.K.DAS,V.BERTOLASI 1995, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 51, 2408' adoshc ribose_C2endo_O3H 1 3.70 0.001-0.005A 'ADENOSINE HYDROCHLORIDE' 'K.SHIKATA,T.UEKI,T.MITSUI 1973, ACTA CRYSTALLOGR.,SECT.B, 29, 31' amurid ribose_C2endo_O3H 1 7.60 0.006-0.010A 5-AMINOURIDINE 'E.EGERT,H.J.LINDNER,W.HILLEN,H.G.GASSEN 1978, ACTA CRYSTALLOGR.,SECT.B, 34, 2204' barfup ribose_C2endo_O3H 1 4.90 0.006-0.010A 6-BENZYLAMINO-9-BETA-D-RIBOFURANOSYLPURINE 'T.TAKEDA,Y.OHASHI,Y.SASADA,M.KAKUDO 1976, ACTA CRYSTALLOGR.,SECT.B, 32, 614' bibxit ribose_C2endo_O3H 1 5.10 0.006-0.010A '4-AMINO-1-BETA-D-RIBOFURANOSYL-PYRIMIDINE-2,6(1H,3H)-DIONE MONOHYDRATE' 'J.GORSKI,P.TOLLIN 1982, CRYST.STRUCT.COMMUN., 11, 543' bimfei10 ribose_C2endo_O3H 1 3.70 0.001-0.005A 1,N-6--ETHENOADENOSINE 'M.JASKOLSKI 1982, ACTA CRYSTALLOGR.,SECT.B, 38, 3171' bimfim10 ribose_C2endo_O3H 1 4.50 0.001-0.005A '1,N-6--ETHENOADENOSINE HYDROCHLORIDE' 'M.JASKOLSKI 1984, J.CRYSTALLOGR.SPECTROSC.RES., 14, 45' cekluz ribose_C2endo_O3H 1 4.90 0.001-0.005A 'DISODIUM URIDINE DIPHOSPHOGLUCOSE DIHYDRATE' 'Y.SUGAWARA,H.IWASAKI 1984, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 40, 389' clurid10 ribose_C2endo_O3H 1 3.15 0.001-0.005A 5-CHLOROURIDINE 'S.W.HAWKINSON,C.L.COULTER 1971, ACTA CRYSTALLOGR.,SECT.B, 27, 34' coczid ribose_C2endo_O3H 1 3.90 0.001-0.005A 'ADENOSINE-5'-O-DIETHYL-PHOSPHATE' 'R.G.BRENNAN,N.S.KONDO,M.SUNDARALINGAM 1984, J.AM.CHEM.SOC., 106, 5671' coxnei ribose_C2endo_O3H 1 3.10 0.001-0.005A '8-CHLORO-GUANOSINE DIHYDRATE' 'G.I.BIRNBAUM,P.LASSOTA,D.SHUGAR 1984, BIOCHEMISTRY, 23, 5048' cutvao ribose_C2endo_O3H 1 3.90 0.001-0.005A XANTHOSINE 'B.LESYNG,C.MARCK,W.SAENGER 1984, Z.NATURFORSCH.,TEIL C, 39, 720' cyticl ribose_C2endo_O3H 1 2.80 0.001-0.005A 'CYTIDINIUM CHLORIDE' 'A.MOSSET,J.J.BONNET,J.GALY 1979, ACTA CRYSTALLOGR.,SECT.B, 35, 1908' demxey ribose_C2endo_O3H 1 5.30 0.006-0.010A '8-METHYLGUANOSINE TRIHYDRATE' ;K.HAMADA,I.HONDA,S.FUJII,T.FUJIWARA,K.-I.TOMITA 1985, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 41, 1486 ; dmurid ribose_C2endo_O3H 1 5.80 0.006-0.010A 5-DIMETHYLAMINO-URIDINE 'E.EGERT,H.J.LINDNER,W.HILLEN,H.G.GASSEN 1979, ACTA CRYSTALLOGR.,SECT.B, 35, 920' dotxuf10 ribose_C2endo_O3H 1 5.70 0.001-0.005A ;TRYPTAMINIUM 7-METHYLGUANOSINE 5'-MONOPHOSPHATE TRIHYDRATE ; 'T.ISHIDA,M.DOI,H.UEDA,M.INOUE,G.M.SHELDRICK 1988, J.AM.CHEM.SOC., 110, 2286' erfimp ribose_C2endo_O3H 1 4.30 0.006-0.010A '7-ETHYL-3-BETA-D-RIBOFURANOSYLIMIDAZO(2,1-I)PURINE CHLORIDE MONOHYDRATE' 'A.H.-J.WANG,L.G.DAMMANN,J.R.BARRIO,I.C.PAUL 1974, J.AM.CHEM.SOC., 96, 1205' fucwij ribose_C2endo_O3H 1 4.90 0.001-0.005A 'N-6--DIDEHYDRO-1,6-DIHYDRO-1-METHYLADENOSINE TRIHYDRATE' 'Y.YAMAGATA,K.-I.TOMITA 1987, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 43, 2117' fucwij ribose_C2endo_O3H 2 4.90 0.001-0.005A 'N-6--DIDEHYDRO-1,6-DIHYDRO-1-METHYLADENOSINE TRIHYDRATE' 'Y.YAMAGATA,K.-I.TOMITA 1987, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 43, 2117' gicmou ribose_C2endo_O3H 1 4.10 0.001-0.005A 'N-4--AMINOCYTIDINE HEMIHYDRATE (MUTAGENIC ACTIVITY)' ;S.KASHINO,K.NEGISHI,H.HAYATSU 1988, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 44, 1454 ; gicmou ribose_C2endo_O3H 2 4.10 0.001-0.005A 'N-4--AMINOCYTIDINE HEMIHYDRATE (MUTAGENIC ACTIVITY)' ;S.KASHINO,K.NEGISHI,H.HAYATSU 1988, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 44, 1454 ; guansh10 ribose_C2endo_O3H 1 3.60 0.001-0.005A 'GUANOSINE DIHYDRATE' 'U.THEWALT,C.E.BUGG,R.E.MARSH 1970, ACTA CRYSTALLOGR.,SECT.B, 26, 1089' guansh10 ribose_C2endo_O3H 2 3.60 0.001-0.005A 'GUANOSINE DIHYDRATE' 'U.THEWALT,C.E.BUGG,R.E.MARSH 1970, ACTA CRYSTALLOGR.,SECT.B, 26, 1089' guopna10 ribose_C2endo_O3H 1 5.60 0.006-0.010A ;DISODIUM GUANOSINE-5'-PHOSPHATE HEPTAHYDRATE ; 'C.L.BARNES,S.W.HAWKINSON 1982, ACTA CRYSTALLOGR.,SECT.B, 38, 812' guopna10 ribose_C2endo_O3H 2 5.60 0.006-0.010A ;DISODIUM GUANOSINE-5'-PHOSPHATE HEPTAHYDRATE ; 'C.L.BARNES,S.W.HAWKINSON 1982, ACTA CRYSTALLOGR.,SECT.B, 38, 812' guopna11 ribose_C2endo_O3H 1 5.70 0.006-0.010A ;DISODIUM GUANOSINE-5'-PHOSPHATE HEPTAHYDRATE ; 'S.K.KATTI,T.P.SESHADRI,M.A.VISWAMITRA 1981, ACTA CRYSTALLOGR.,SECT.B, 37, 1825' guopna11 ribose_C2endo_O3H 2 5.70 0.006-0.010A ;DISODIUM GUANOSINE-5'-PHOSPHATE HEPTAHYDRATE ; 'S.K.KATTI,T.P.SESHADRI,M.A.VISWAMITRA 1981, ACTA CRYSTALLOGR.,SECT.B, 37, 1825' hipads ribose_C2endo_O3H 1 3.10 0.001-0.005A '8-(ALPHA-HYDROXYISOPROPYL)-ADENOSINE DIHYDRATE' 'G.I.BIRNBAUM,D.SHUGAR 1978, BIOCHIM.BIOPHYS.ACTA, 517, 500' hxurid ribose_C2endo_O3H 1 2.60 0.001-0.005A 5-HYDROXYURIDINE 'U.THEWALT,C.E.BUGG 1973, ACTA CRYSTALLOGR.,SECT.B, 29, 1393' jawjia ribose_C2endo_O3H 1 2.96 0.001-0.005A '7-METHYL-8-OXO-7,8-DIHYDROGUANOSINE MONOHYDRATE' ;S.B.LARSON,H.B.COTTAM,R.K.ROBINS 1989, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 45, 1979 ; jigcux ribose_C2endo_O3H 1 2.78 0.001-0.005A '2-AMINO-9-BETA-D-RIBOFURANOSYLPURINE-2-SULFONAMIDE 2-SULFAMOYLADENOSINE' 'N.B.HANNA,S.B.LARSON,R.K.ROBINS,G.R.REVANKAR 1990, J.HETEROCYCL.CHEM., 27, 1713' kehzay ribose_C2endo_O3H 1 2.86 0.001-0.005A ;2-AMINO-7-METHYL-9-(BETA-D-RIBOFURANOSYL)-8(9H)-THIOXOPURIN-6(1H)-ONE MONOHYDRATE (IMMUNE SYSTEM STIMULATORY ACTION) ; ;S.B.LARSON,E.M.HENRY,G.D.KINI,R.K.ROBINS 1990, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 46, 506 ; lumzrf01 ribose_C2endo_O3H 1 5.90 0.001-0.005A 6,7-DIMETHYL-N-1-BETA-D-RIBOFURANOSYL-LUMAZINE 'W.SAENGER,G.RITZMANN,W.PFLEIDERER 1977, ACTA CRYSTALLOGR.,SECT.B, 33, 2989' lumzrf01 ribose_C2endo_O3H 2 5.90 0.001-0.005A 6,7-DIMETHYL-N-1-BETA-D-RIBOFURANOSYL-LUMAZINE 'W.SAENGER,G.RITZMANN,W.PFLEIDERER 1977, ACTA CRYSTALLOGR.,SECT.B, 33, 2989' mguosm ribose_C2endo_O3H 1 3.06 0.001-0.005A '2-N-METHYLGUANOSINE MONOHYDRATE' 'R.A.G.DE GRAAFF,F.B.MARTENS,C.ROMERS 1978, ACTA CRYSTALLOGR.,SECT.B, 34, 3012' mguosm01 ribose_C2endo_O3H 1 4.30 0.006-0.010A 'N-2--METHYL-GUANOSINE MONOHYDRATE' 'S.L.GINELL,R.PARTHASARATHY 1978, BIOCHEM.BIOPHYS.RES.COMM., 84, 886' palaur10 ribose_C2endo_O3H 1 6.70 0.006-0.010A '5-(N-(L-PHENYLALANYL)AMINO)URIDINE PEPSEQ A=2 PHE-ALA*' 'H.M.BERMAN,W.C.HAMILTON,R.J.ROUSSEAU 1973, BIOCHEMISTRY, 12, 1809' pctrib10 ribose_C2endo_O3H 1 4.10 0.001-0.005A N-6--(N-THREONYLCARBONYL)ADENOSINE 'R.PARTHASARATHY,J.M.OHRT,G.B.CHHEDA 1977, BIOCHEMISTRY, 16, 4999' selzis ribose_C2endo_O3H 1 4.10 0.001-0.005A 3-(8-XANTHOSYL)XANTHINE 'XINHUA JI,P.SUBRAMANIAN,D.VAN DER HELM,G.DRYHURST 1990, J.ORG.CHEM., 55, 1291' selzis ribose_C2endo_O3H 2 4.10 0.001-0.005A 3-(8-XANTHOSYL)XANTHINE 'XINHUA JI,P.SUBRAMANIAN,D.VAN DER HELM,G.DRYHURST 1990, J.ORG.CHEM., 55, 1291' suromm ribose_C2endo_O3H 1 2.50 0.006-0.010A ;SODIUM URIDINE-5'-O-METHYLPHOSPHATE METHANOL SOLVATE ; 'J.D.HOOGENDORP,C.ROMERS 1978, ACTA CRYSTALLOGR.,SECT.B, 34, 2724' toaden ribose_C2endo_O3H 1 4.80 0.006-0.010A '8-THIOXO-ADENOSINE MONOHYDRATE' ;H.MIZUNO,K.KITAMURA,A.MIYAO,Y.YAMAGATA,A.WAKAHARA,K.TOMITA,M.IKEHARA 1980, ACTA CRYSTALLOGR.,SECT.B, 36, 902 ; vuymad ribose_C2endo_O3H 1 2.90 0.001-0.005A 'CYTIDINIUM DIHYDROGENPHOSPHATE' 'M.JASKOLSKI 1989, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 45, 85' yidkif ribose_C2endo_O3H 1 2.97 0.001-0.005A 'BIS(CYTIDINIUM) SULFATE' 'M.GILSKI,M.JASKOLSKI 1993, POL.J.CHEM., 67, 1841' yidkif ribose_C2endo_O3H 2 2.97 0.001-0.005A 'BIS(CYTIDINIUM) SULFATE' 'M.GILSKI,M.JASKOLSKI 1993, POL.J.CHEM., 67, 1841' zaytic ribose_C2endo_O3H 1 3.45 0.001-0.005A '3-METHYLURIDINE (ABSOLUTE CONFIGURATION BY REFINEMENT OF THE FLACK PARAMETER)' ;B.L.PARTRIDGE,C.E.PRITCHARD 1995, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 51, 1929 ; zexwee ribose_C2endo_O3H 1 3.66 0.006-0.010A ;2-CHLORO-N-(1-PHENYL-2(R)-PROPYL)-9-BETA-D-RIBOFURANOSYL-9H-PURIN-6-AMINE (ACTIVATING AGENT OF ADENOSINE A2 RECEPTOR) N-(1-PHENYL-2(R)-PROPYL)-2-CHLORO-ADENOSINE ; 'A.K.DAS,V.BERTOLASI 1995, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 51, 2408' cekluz ribose_C2endo_O5P 1 4.90 0.001-0.005A 'DISODIUM URIDINE DIPHOSPHOGLUCOSE DIHYDRATE' 'Y.SUGAWARA,H.IWASAKI 1984, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 40, 389' coczid ribose_C2endo_O5P 1 3.90 0.001-0.005A 'ADENOSINE-5'-O-DIETHYL-PHOSPHATE' 'R.G.BRENNAN,N.S.KONDO,M.SUNDARALINGAM 1984, J.AM.CHEM.SOC., 106, 5671' daurid01 ribose_C2endo_O5P 1 3.95 0.001-0.005A ;3',5'-DIACETYLURIDINE (AT -170DEG.C) ; ;R.A.G.DE GRAAFF,G.ADMIRAAL,E.H.KOEN,C.ROMERS 1977, ACTA CRYSTALLOGR.,SECT.B, 33, 2459 ; dotxuf10 ribose_C2endo_O5P 1 5.70 0.001-0.005A ;TRYPTAMINIUM 7-METHYLGUANOSINE 5'-MONOPHOSPHATE TRIHYDRATE ; 'T.ISHIDA,M.DOI,H.UEDA,M.INOUE,G.M.SHELDRICK 1988, J.AM.CHEM.SOC., 110, 2286' guopna10 ribose_C2endo_O5P 1 5.60 0.006-0.010A ;DISODIUM GUANOSINE-5'-PHOSPHATE HEPTAHYDRATE ; 'C.L.BARNES,S.W.HAWKINSON 1982, ACTA CRYSTALLOGR.,SECT.B, 38, 812' guopna10 ribose_C2endo_O5P 2 5.60 0.006-0.010A ;DISODIUM GUANOSINE-5'-PHOSPHATE HEPTAHYDRATE ; 'C.L.BARNES,S.W.HAWKINSON 1982, ACTA CRYSTALLOGR.,SECT.B, 38, 812' guopna11 ribose_C2endo_O5P 1 5.70 0.006-0.010A ;DISODIUM GUANOSINE-5'-PHOSPHATE HEPTAHYDRATE ; 'S.K.KATTI,T.P.SESHADRI,M.A.VISWAMITRA 1981, ACTA CRYSTALLOGR.,SECT.B, 37, 1825' guopna11 ribose_C2endo_O5P 2 5.70 0.006-0.010A ;DISODIUM GUANOSINE-5'-PHOSPHATE HEPTAHYDRATE ; 'S.K.KATTI,T.P.SESHADRI,M.A.VISWAMITRA 1981, ACTA CRYSTALLOGR.,SECT.B, 37, 1825' suromm ribose_C2endo_O5P 1 2.50 0.006-0.010A ;SODIUM URIDINE-5'-O-METHYLPHOSPHATE METHANOL SOLVATE ; 'J.D.HOOGENDORP,C.ROMERS 1978, ACTA CRYSTALLOGR.,SECT.B, 34, 2724' dinyii10 all_ribose_gamma 1 4.10 0.006-0.010A ;SODIUM BIS(DEOXYCYTIDYLYL-(3'-5')-DEOXYGUANOSINE) DINUCLEOTIDE HEPTAHYDRATE ; 'M.COLL,X.SOLANS,M.FONT-ALTABA,J.A.SUBIRANA 1987, J.BIOMOL.STRUCT.DYN., 4, 797' dinyii10 all_ribose_gamma 2 4.10 0.006-0.010A ;SODIUM BIS(DEOXYCYTIDYLYL-(3'-5')-DEOXYGUANOSINE) DINUCLEOTIDE HEPTAHYDRATE ; 'M.COLL,X.SOLANS,M.FONT-ALTABA,J.A.SUBIRANA 1987, J.BIOMOL.STRUCT.DYN., 4, 797' dinyii10 all_ribose_gamma 3 4.10 0.006-0.010A ;SODIUM BIS(DEOXYCYTIDYLYL-(3'-5')-DEOXYGUANOSINE) DINUCLEOTIDE HEPTAHYDRATE ; 'M.COLL,X.SOLANS,M.FONT-ALTABA,J.A.SUBIRANA 1987, J.BIOMOL.STRUCT.DYN., 4, 797' dinyii10 all_ribose_gamma 4 4.10 0.006-0.010A ;SODIUM BIS(DEOXYCYTIDYLYL-(3'-5')-DEOXYGUANOSINE) DINUCLEOTIDE HEPTAHYDRATE ; 'M.COLL,X.SOLANS,M.FONT-ALTABA,J.A.SUBIRANA 1987, J.BIOMOL.STRUCT.DYN., 4, 797' duhhuj all_ribose_gamma 1 2.70 0.001-0.005A ;5-METHOXYMETHYL-2'-DEOXYURIDINE (ANTIVIRAL AGENT) ; ;O.A.L.EL-KABBANI,I.EKIEL,L.T.J.DELBAERE,G.TOURIGNY,A.L.STUART,S.V.GUPTA 1986, NUCLEOSIDES AND NUCLEOTIDES, 5, 95 ; dumtou all_ribose_gamma 1 4.20 0.001-0.005A (-)-CIS-(5S,6S)-5-HYDROXY-5-METHYL-6-ETHYLAMINO-5,6-DIHYDROTHYMIDINE ;T.HARAYAMA,R.YANADA,T.TAGA,K.MACHIDA,J.CADET,F.YONEDA 1986, J.CHEM.SOC.,CHEM.COMM.,, 1469 ; dumtou10 all_ribose_gamma 1 3.60 0.001-0.005A (5S,6S)-CIS-(+)-6-ETHYLAMINO-5-HYDROXY-5,6-DIHYDROTHYMIDINE ;T.HARAYAMA,R.YANADA,M.TANAKA,T.TAGA,K.MACHIDA,F.YONEDA,J.CADET 1988, J.CHEM.SOC.,PERKIN TRANS.1,, 2555 ; fmdurd02 all_ribose_gamma 1 3.30 0.006-0.010A '5-TRIFLUOROMETHYL-2'-DEOXYURIDINE' 'T.SATO 1989, ANAL.SCI., 5, 117' foylua all_ribose_gamma 1 4.40 0.001-0.005A '3'-O-ACETYL-2'-DEOXYADENOSINE' ;J.N.LOW,P.TOLLIN,R.A.HOWIE 1987, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 43, 2184 ; gexxiq all_ribose_gamma 1 4.90 0.001-0.005A ;3'-O-ACETYLTHYMIDINE (ORTHORHOMBIC FORM) ; ;R.S.ECCLESTON,C.C.WILSON,R.A.HOWIE 1988, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 44, 1424 ; gexxiq01 all_ribose_gamma 1 5.00 0.006-0.010A ;3'-O-ACETYLTHYMIDINE (HEXAGONAL FORM) ; 'A.SCHOUTEN,J.A.KANTERS 1991, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 47, 1320' ipdxur all_ribose_gamma 1 6.10 0.001-0.005A 'BETA-5-ISOPROPYL-2'-DEOXYURIDINE' ;M.CZUGLER,A.KALMAN,J.T.SAGI,A.SZABOLCS,L.OTVOS 1979, ACTA CRYSTALLOGR.,SECT.B, 35, 1626 ; ipdxur01 all_ribose_gamma 1 6.10 0.001-0.005A 'BETA-5-ISOPROPYL-2'-DEOXYURIDINE' 'C.MATYAS,K.ALAKOS 1993, ACTA PHARM.HUNG., 63, 193' jafhih all_ribose_gamma 2 3.10 0.001-0.005A ;2'-DEOXY-3',5'-DI-O-ACETYL GUANOSINE ; 'L.H.KOOLE,H.M.BUCK,J.A.KANTERS,A.SCHOUTEN 1988, CAN.J.CHEM., 66, 2634' jibdih all_ribose_gamma 1 3.00 0.001-0.005A ;2'-DEOXYCYTIDINIUM DIHYDROGENPHOSPHATE ; 'M.JASKOLSKI 1991, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 47, 153' jubvor all_ribose_gamma 1 4.37 0.001-0.005A ;1-(2'-DEOXY-BETA-D-RIBOFURANOSYL)-6,7-DIPHENYL-LUMAZINE (AT 183 DEG.K) ; ;XIAODONG CAO,W.PFLEIDERER,H.ROSEMEYER,F.SEELA,W.BANNWARTH,P.SCHONHOLZER 1992, HELV.CHIM.ACTA, 75, 1267 ; keclot all_ribose_gamma 1 4.30 0.006-0.010A ;8-AMINO-3,10-DIHYDRO-10-OXO-3-(BETA-D-2-DEOXYRIBOFURANOSYL)-3H-1,3,5-TRIAZINO(1,2-A)PURINE MONOHYDRATE DIDA'-METAMORPHOSINE MONOHYDRATE ; 'S.KUMAR,F.T.OAKES,S.R.WILSON,N.J.LEONARD 1988, HETEROCYCLES, 27, 2891' poggat all_ribose_gamma 1 4.20 0.006-0.010A ;BIS(2'-DEOXYCYTIDINE) DIHYDROGEN PHOSPHATE ; ;M.JASKOLSKI,M.GDANIEC,M.GILSKI,M.ALEJSKA,M.D.BRATEK-WIEWIOROWSKA 1994, J.BIOMOL.STRUCT.DYN., 11, 1287 ; poggat all_ribose_gamma 2 4.20 0.006-0.010A ;BIS(2'-DEOXYCYTIDINE) DIHYDROGEN PHOSPHATE ; ;M.JASKOLSKI,M.GDANIEC,M.GILSKI,M.ALEJSKA,M.D.BRATEK-WIEWIOROWSKA 1994, J.BIOMOL.STRUCT.DYN., 11, 1287 ; poggat all_ribose_gamma 3 4.20 0.006-0.010A ;BIS(2'-DEOXYCYTIDINE) DIHYDROGEN PHOSPHATE ; ;M.JASKOLSKI,M.GDANIEC,M.GILSKI,M.ALEJSKA,M.D.BRATEK-WIEWIOROWSKA 1994, J.BIOMOL.STRUCT.DYN., 11, 1287 ; poggat all_ribose_gamma 4 4.20 0.006-0.010A ;BIS(2'-DEOXYCYTIDINE) DIHYDROGEN PHOSPHATE ; ;M.JASKOLSKI,M.GDANIEC,M.GILSKI,M.ALEJSKA,M.D.BRATEK-WIEWIOROWSKA 1994, J.BIOMOL.STRUCT.DYN., 11, 1287 ; pryurd10 all_ribose_gamma 1 2.70 0.006-0.010A '5-(2-PROPYNYLOXY)-2'-DEOXYURIDINE' 'G.S.D.KING,L.SENGIER-ROBERTS 1982, J.CHEM.RES., 25, 722' sifkex all_ribose_gamma 1 2.80 0.001-0.005A ;5-((1S,2S)-2-CHLOROCYCLOPROPYL)-1-(2-DEOXY-BETA-D-RIBOFURANOSYL)URACIL (ABSOLUTE CONFIGURATION) ; ;S.C.MOSIMANN,B.D.SANTARSIERO,M.N.G.JAMES,M.TANDON,L.I.WIEBE,E.E.KNAUS 1990, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 46, 2115 ; vexdor all_ribose_gamma 1 4.40 0.001-0.005A ;5-METHOXYMETHYL-2'-DEOXYCYTIDINE (ANTIVIRAL AGENT) MMDCYD ; ;ZONGCHAO JIA,G.TOURIGNY,L.T.J.DELBAERE,A.L.STUART,S.V.GUPTA 1990, CAN.J.CHEM., 68, 836 ; vexdor all_ribose_gamma 2 4.40 0.001-0.005A ;5-METHOXYMETHYL-2'-DEOXYCYTIDINE (ANTIVIRAL AGENT) MMDCYD ; ;ZONGCHAO JIA,G.TOURIGNY,L.T.J.DELBAERE,A.L.STUART,S.V.GUPTA 1990, CAN.J.CHEM., 68, 836 ; zasquf all_ribose_gamma 1 3.80 0.001-0.005A ;3'-O-METHYLTHIOMETHYLTHYMIDINE MONOHYDRATE (POTENTIAL INHIBITORY ACTIVITY AGAINST HIV) ; ;V.A.BOCHKAREV,S.G.ZAVGORODNY,A.S.ZHDANOV,G.V.GURSKAYA 1995, BIOORG.KHIM., 21, 206 ; zasram all_ribose_gamma 1 2.80 0.001-0.005A ;3'-O-METHYLSULFINYLMETHYLTHYMIDINE (POTENTIAL INHIBITORY ACTIVITY AGAINST HIV) ; ;V.A.BOCHKAREV,S.G.ZAVGORODNY,A.S.ZHDANOV,G.V.GURSKAYA 1995, BIOORG.KHIM., 21, 206 ; zedhiz all_ribose_gamma 1 5.40 0.006-0.010A ;(1S,6S)-6,7,7,8,8-PENTAMETHYL-2-(BETA-D-2-DEOXYRIBOFURANOSYL)-CIS-2,4-DIAZABICYCLO(4.2.0)OCTANE-3,5-DIONE ; 'N.HAGA,I.ISHIKAWA,H.TAKAYANAGI,H.OGURA 1994, BULL.CHEM.SOC.JPN., 67, 728' docytc all_ribose_gamma 1 3.50 0.001-0.005A ;2'-DEOXYCYTIDINE HYDROCHLORIDE (ABSOLUTE CONFIGURATION) ; 'E.SUBRAMANIAN,D.J.HUNT 1970, ACTA CRYSTALLOGR.,SECT.B, 26, 303' gidtiw all_ribose_gamma 1 4.20 0.006-0.010A 'N-4--(UREIDOCARBONYL)-2'DEOXYCYTIDINE' 'S.KUMAR,N.J.LEONARD 1988, J.ORG.CHEM., 53, 3959' zozvuf all_ribose_gamma 1 4.56 0.001-0.005A ;(4-AMINO-1-(2-DEOXY-BETA-D-RIBOFURANOSYL)-2-OXO-1H-3-PYRIMIDINIO)(CYANO)BORATE MONOHYDRATE (IN VIVO ANTINEOPLASTIC ACTIVITY AGAINST VARIOUS TUMORS, WITH POTENTIAL USE IN BORON NEUTRON-CAPTURE THERAPY FOR BRAIN CANCER) 2'-DEOXYCYTIDINE-N(3)-CYANOBORANE MONOHYDRATE ; ;P.SINGH,M.ZOTTOLA,SAQING HUANG,B.R.SHAW,L.G.PEDERSEN 1996, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 52, 693 ; acados all_ribose_gamma 1 4.10 0.006-0.010A '3'-O-ACETYLADENOSINE' 'S.T.RAO,M.SUNDARALINGAM 1970, J.AM.CHEM.SOC., 92, 4963' adoshc all_ribose_gamma 1 3.70 0.001-0.005A 'ADENOSINE HYDROCHLORIDE' 'K.SHIKATA,T.UEKI,T.MITSUI 1973, ACTA CRYSTALLOGR.,SECT.B, 29, 31' amurid all_ribose_gamma 1 7.60 0.006-0.010A 5-AMINOURIDINE 'E.EGERT,H.J.LINDNER,W.HILLEN,H.G.GASSEN 1978, ACTA CRYSTALLOGR.,SECT.B, 34, 2204' bibxit all_ribose_gamma 1 5.10 0.006-0.010A '4-AMINO-1-BETA-D-RIBOFURANOSYL-PYRIMIDINE-2,6(1H,3H)-DIONE MONOHYDRATE' 'J.GORSKI,P.TOLLIN 1982, CRYST.STRUCT.COMMUN., 11, 543' bimfei10 all_ribose_gamma 1 3.70 0.001-0.005A 1,N-6--ETHENOADENOSINE 'M.JASKOLSKI 1982, ACTA CRYSTALLOGR.,SECT.B, 38, 3171' bimfim10 all_ribose_gamma 1 4.50 0.001-0.005A '1,N-6--ETHENOADENOSINE HYDROCHLORIDE' 'M.JASKOLSKI 1984, J.CRYSTALLOGR.SPECTROSC.RES., 14, 45' clurid10 all_ribose_gamma 1 3.15 0.001-0.005A 5-CHLOROURIDINE 'S.W.HAWKINSON,C.L.COULTER 1971, ACTA CRYSTALLOGR.,SECT.B, 27, 34' coczid all_ribose_gamma 1 3.90 0.001-0.005A 'ADENOSINE-5'-O-DIETHYL-PHOSPHATE' 'R.G.BRENNAN,N.S.KONDO,M.SUNDARALINGAM 1984, J.AM.CHEM.SOC., 106, 5671' coxnei all_ribose_gamma 1 3.10 0.001-0.005A '8-CHLORO-GUANOSINE DIHYDRATE' 'G.I.BIRNBAUM,P.LASSOTA,D.SHUGAR 1984, BIOCHEMISTRY, 23, 5048' cutvao all_ribose_gamma 1 3.90 0.001-0.005A XANTHOSINE 'B.LESYNG,C.MARCK,W.SAENGER 1984, Z.NATURFORSCH.,TEIL C, 39, 720' cytiac01 all_ribose_gamma 1 7.30 0.006-0.010A ;CYTIDINE-3'-PHOSPHATE (MONOCLINIC FORM) CYTIDYLIC ACID B ; 'C.E.BUGG,R.E.MARSH 1967, J.MOL.BIOL., 25, 67' cyticl all_ribose_gamma 1 2.80 0.001-0.005A 'CYTIDINIUM CHLORIDE' 'A.MOSSET,J.J.BONNET,J.GALY 1979, ACTA CRYSTALLOGR.,SECT.B, 35, 1908' demxey all_ribose_gamma 1 5.30 0.006-0.010A '8-METHYLGUANOSINE TRIHYDRATE' ;K.HAMADA,I.HONDA,S.FUJII,T.FUJIWARA,K.-I.TOMITA 1985, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 41, 1486 ; dotxuf10 all_ribose_gamma 1 5.70 0.001-0.005A ;TRYPTAMINIUM 7-METHYLGUANOSINE 5'-MONOPHOSPHATE TRIHYDRATE ; 'T.ISHIDA,M.DOI,H.UEDA,M.INOUE,G.M.SHELDRICK 1988, J.AM.CHEM.SOC., 110, 2286' fucwij all_ribose_gamma 1 4.90 0.001-0.005A 'N-6--DIDEHYDRO-1,6-DIHYDRO-1-METHYLADENOSINE TRIHYDRATE' 'Y.YAMAGATA,K.-I.TOMITA 1987, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 43, 2117' gicmou all_ribose_gamma 1 4.10 0.001-0.005A 'N-4--AMINOCYTIDINE HEMIHYDRATE (MUTAGENIC ACTIVITY)' ;S.KASHINO,K.NEGISHI,H.HAYATSU 1988, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 44, 1454 ; gicmou all_ribose_gamma 2 4.10 0.001-0.005A 'N-4--AMINOCYTIDINE HEMIHYDRATE (MUTAGENIC ACTIVITY)' ;S.KASHINO,K.NEGISHI,H.HAYATSU 1988, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 44, 1454 ; guansh10 all_ribose_gamma 1 3.60 0.001-0.005A 'GUANOSINE DIHYDRATE' 'U.THEWALT,C.E.BUGG,R.E.MARSH 1970, ACTA CRYSTALLOGR.,SECT.B, 26, 1089' guansh10 all_ribose_gamma 2 3.60 0.001-0.005A 'GUANOSINE DIHYDRATE' 'U.THEWALT,C.E.BUGG,R.E.MARSH 1970, ACTA CRYSTALLOGR.,SECT.B, 26, 1089' guopna10 all_ribose_gamma 1 5.60 0.006-0.010A ;DISODIUM GUANOSINE-5'-PHOSPHATE HEPTAHYDRATE ; 'C.L.BARNES,S.W.HAWKINSON 1982, ACTA CRYSTALLOGR.,SECT.B, 38, 812' guopna10 all_ribose_gamma 2 5.60 0.006-0.010A ;DISODIUM GUANOSINE-5'-PHOSPHATE HEPTAHYDRATE ; 'C.L.BARNES,S.W.HAWKINSON 1982, ACTA CRYSTALLOGR.,SECT.B, 38, 812' guopna11 all_ribose_gamma 1 5.70 0.006-0.010A ;DISODIUM GUANOSINE-5'-PHOSPHATE HEPTAHYDRATE ; 'S.K.KATTI,T.P.SESHADRI,M.A.VISWAMITRA 1981, ACTA CRYSTALLOGR.,SECT.B, 37, 1825' guopna11 all_ribose_gamma 2 5.70 0.006-0.010A ;DISODIUM GUANOSINE-5'-PHOSPHATE HEPTAHYDRATE ; 'S.K.KATTI,T.P.SESHADRI,M.A.VISWAMITRA 1981, ACTA CRYSTALLOGR.,SECT.B, 37, 1825' hipads all_ribose_gamma 1 3.10 0.001-0.005A '8-(ALPHA-HYDROXYISOPROPYL)-ADENOSINE DIHYDRATE' 'G.I.BIRNBAUM,D.SHUGAR 1978, BIOCHIM.BIOPHYS.ACTA, 517, 500' hxurid all_ribose_gamma 1 2.60 0.001-0.005A 5-HYDROXYURIDINE 'U.THEWALT,C.E.BUGG 1973, ACTA CRYSTALLOGR.,SECT.B, 29, 1393' jawjia all_ribose_gamma 1 2.96 0.001-0.005A '7-METHYL-8-OXO-7,8-DIHYDROGUANOSINE MONOHYDRATE' ;S.B.LARSON,H.B.COTTAM,R.K.ROBINS 1989, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 45, 1979 ; kehzay all_ribose_gamma 1 2.86 0.001-0.005A ;2-AMINO-7-METHYL-9-(BETA-D-RIBOFURANOSYL)-8(9H)-THIOXOPURIN-6(1H)-ONE MONOHYDRATE (IMMUNE SYSTEM STIMULATORY ACTION) ; ;S.B.LARSON,E.M.HENRY,G.D.KINI,R.K.ROBINS 1990, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 46, 506 ; kurdmp all_ribose_gamma 1 3.50 0.001-0.005A ;POTASSIUM DIHYDROURIDINE-3'-MONOPHOSPHATE HEMIHYDRATE ; 'J.EMERSON,M.SUNDARALINGAM 1980, ACTA CRYSTALLOGR.,SECT.B, 36, 537' lumzrf01 all_ribose_gamma 1 5.90 0.001-0.005A 6,7-DIMETHYL-N-1-BETA-D-RIBOFURANOSYL-LUMAZINE 'W.SAENGER,G.RITZMANN,W.PFLEIDERER 1977, ACTA CRYSTALLOGR.,SECT.B, 33, 2989' lumzrf01 all_ribose_gamma 2 5.90 0.001-0.005A 6,7-DIMETHYL-N-1-BETA-D-RIBOFURANOSYL-LUMAZINE 'W.SAENGER,G.RITZMANN,W.PFLEIDERER 1977, ACTA CRYSTALLOGR.,SECT.B, 33, 2989' pctrib10 all_ribose_gamma 1 4.10 0.001-0.005A N-6--(N-THREONYLCARBONYL)ADENOSINE 'R.PARTHASARATHY,J.M.OHRT,G.B.CHHEDA 1977, BIOCHEMISTRY, 16, 4999' selzis all_ribose_gamma 1 4.10 0.001-0.005A 3-(8-XANTHOSYL)XANTHINE 'XINHUA JI,P.SUBRAMANIAN,D.VAN DER HELM,G.DRYHURST 1990, J.ORG.CHEM., 55, 1291' selzis all_ribose_gamma 2 4.10 0.001-0.005A 3-(8-XANTHOSYL)XANTHINE 'XINHUA JI,P.SUBRAMANIAN,D.VAN DER HELM,G.DRYHURST 1990, J.ORG.CHEM., 55, 1291' uridmp10 all_ribose_gamma 1 5.10 0.006-0.010A ;URIDINE-3'-MONOPHOSPHATE MONOHYDRATE ; 'T.SRIKRISHNAN,S.M.FRIDEY,R.PARTHASARATHY 1979, J.AM.CHEM.SOC., 101, 3739' vuymad all_ribose_gamma 1 2.90 0.001-0.005A 'CYTIDINIUM DIHYDROGENPHOSPHATE' 'M.JASKOLSKI 1989, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 45, 85' yidkif all_ribose_gamma 1 2.97 0.001-0.005A 'BIS(CYTIDINIUM) SULFATE' 'M.GILSKI,M.JASKOLSKI 1993, POL.J.CHEM., 67, 1841' yidkif all_ribose_gamma 2 2.97 0.001-0.005A 'BIS(CYTIDINIUM) SULFATE' 'M.GILSKI,M.JASKOLSKI 1993, POL.J.CHEM., 67, 1841' zaytic all_ribose_gamma 1 3.45 0.001-0.005A '3-METHYLURIDINE (ABSOLUTE CONFIGURATION BY REFINEMENT OF THE FLACK PARAMETER)' ;B.L.PARTRIDGE,C.E.PRITCHARD 1995, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 51, 1929 ; zexwee all_ribose_gamma 1 3.66 0.006-0.010A ;2-CHLORO-N-(1-PHENYL-2(R)-PROPYL)-9-BETA-D-RIBOFURANOSYL-9H-PURIN-6-AMINE (ACTIVATING AGENT OF ADENOSINE A2 RECEPTOR) N-(1-PHENYL-2(R)-PROPYL)-2-CHLORO-ADENOSINE ; 'A.K.DAS,V.BERTOLASI 1995, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 51, 2408' admpot10 all_ribose_gamma 1 2.90 0.001-0.005A ;ADENOSINE-5'-METHYLPHOSPHONATE HEMIHYDRATE ; 'C.L.BARNES,S.W.HAWKINSON 1979, ACTA CRYSTALLOGR.,SECT.B, 35, 1724' admpot10 all_ribose_gamma 2 2.90 0.001-0.005A ;ADENOSINE-5'-METHYLPHOSPHONATE HEMIHYDRATE ; 'C.L.BARNES,S.W.HAWKINSON 1979, ACTA CRYSTALLOGR.,SECT.B, 35, 1724' adypur10 all_ribose_gamma 1 5.70 0.006-0.010A ;SODIUM ADENYLYL-(3'-5')-URIDINE DINUCLEOTIDE HEXAHYDRATE ; ;N.C.SEEMAN,J.M.ROSENBERG,F.L.SUDDATH,J.J.P.KIM,A.RICH 1976, J.MOL.BIOL., 104, 109 ; adypur10 all_ribose_gamma 2 5.70 0.006-0.010A ;SODIUM ADENYLYL-(3'-5')-URIDINE DINUCLEOTIDE HEXAHYDRATE ; ;N.C.SEEMAN,J.M.ROSENBERG,F.L.SUDDATH,J.J.P.KIM,A.RICH 1976, J.MOL.BIOL., 104, 109 ; adypur10 all_ribose_gamma 3 5.70 0.006-0.010A ;SODIUM ADENYLYL-(3'-5')-URIDINE DINUCLEOTIDE HEXAHYDRATE ; ;N.C.SEEMAN,J.M.ROSENBERG,F.L.SUDDATH,J.J.P.KIM,A.RICH 1976, J.MOL.BIOL., 104, 109 ; adypur10 all_ribose_gamma 4 5.70 0.006-0.010A ;SODIUM ADENYLYL-(3'-5')-URIDINE DINUCLEOTIDE HEXAHYDRATE ; ;N.C.SEEMAN,J.M.ROSENBERG,F.L.SUDDATH,J.J.P.KIM,A.RICH 1976, J.MOL.BIOL., 104, 109 ; apapad10 all_ribose_gamma 1 6.80 0.001-0.005A ;ADENYLYL-(3',5')-ADENYLYL-(3',5')-ADENOSINE TRINUCLEOTIDE HEXAHYDRATE (FORM I) ; 'D.SUCK,P.C.MANOR,W.SAENGER 1976, ACTA CRYSTALLOGR.,SECT.B, 32, 1727' apapad10 all_ribose_gamma 2 6.80 0.001-0.005A ;ADENYLYL-(3',5')-ADENYLYL-(3',5')-ADENOSINE TRINUCLEOTIDE HEXAHYDRATE (FORM I) ; 'D.SUCK,P.C.MANOR,W.SAENGER 1976, ACTA CRYSTALLOGR.,SECT.B, 32, 1727' apapad10 all_ribose_gamma 3 6.80 0.001-0.005A ;ADENYLYL-(3',5')-ADENYLYL-(3',5')-ADENOSINE TRINUCLEOTIDE HEXAHYDRATE (FORM I) ; 'D.SUCK,P.C.MANOR,W.SAENGER 1976, ACTA CRYSTALLOGR.,SECT.B, 32, 1727' beurid10 all_ribose_gamma 1 3.30 0.001-0.005A URIDINE ;E.A.GREEN,R.D.ROSENSTEIN,R.SHIONO,D.J.ABRAHAM,B.L.TRUS,R.E.MARSH 1975, ACTA CRYSTALLOGR.,SECT.B, 31, 102 ; beurid10 all_ribose_gamma 2 3.30 0.001-0.005A URIDINE ;E.A.GREEN,R.D.ROSENSTEIN,R.SHIONO,D.J.ABRAHAM,B.L.TRUS,R.E.MARSH 1975, ACTA CRYSTALLOGR.,SECT.B, 31, 102 ; cytidi01 all_ribose_gamma 1 2.87 0.001-0.005A '4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE BETA-CYTIDINE' 'D.L.WARD 1993, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 49, 1789' cytidi02 all_ribose_gamma 1 5.40 0.001-0.005A 'BETA-CYTIDINE (AT 123 DEG.K, HIGH RESOLUTION REFINEMENT.)' 'LIRONG CHEN,B.M.CRAVEN 1995, ACTA CRYSTALLOGR.,SECT.B (STR.SCI.), 51, 1081' cytidn all_ribose_gamma 1 2.60 0.006-0.010A 'CYTIDINIUM NITRATE' ;J.J.GUY,L.R.NASSIMBENI,G.M.SHELDRICK,R.TAYLOR 1976, ACTA CRYSTALLOGR.,SECT.B, 32, 2909 ; guanph01 all_ribose_gamma 1 3.00 0.001-0.005A ;GUANOSINE-5'-MONOPHOSPHATE TRIHYDRATE (REDETERMINATION OF MURAYAMA ET AL,ACTA CRYST.,B25,2236,1969) ; 'J.EMERSON,M.SUNDARALINGAM 1980, ACTA CRYSTALLOGR.,SECT.B, 36, 1510' hifkem all_ribose_gamma 1 3.60 0.006-0.010A ;TETRASODIUM P,P''-BIS(5'-ADENOSYL)TETRAPHOSPHATE DODECAHYDRATE ; ;D.WATANABE,M.ISHIKAWA,M.YAMASAKI,M.OZAKI,T.KATAYAMA,H.NAKAJIMA 1996, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 52, 338 ; hifkem all_ribose_gamma 2 3.60 0.006-0.010A ;TETRASODIUM P,P''-BIS(5'-ADENOSYL)TETRAPHOSPHATE DODECAHYDRATE ; ;D.WATANABE,M.ISHIKAWA,M.YAMASAKI,M.OZAKI,T.KATAYAMA,H.NAKAJIMA 1996, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 52, 338 ; jucjas all_ribose_gamma 1 6.53 0.006-0.010A '5-CARBOXYMETHYLAMINOMETHYLURIDINE MONOHYDRATE' 'Z.GALDECKI,B.LUCIAK,A.MALKIEWICZ,B.NAWROT 1991, MONATSH.CHEM., 122, 487' meurid all_ribose_gamma 1 7.50 0.006-0.010A '5-METHYLURIDINE HEMIHYDRATE' 'D.J.HUNT,E.SUBRAMANIAN 1969, ACTA CRYSTALLOGR.,SECT.B, 25, 2144' mxurid01 all_ribose_gamma 1 3.10 0.001-0.005A 5-METHOXYURIDINE 'G.I.BIRNBAUM,W.J.P.BLONSKI,F.E.HRUSKA 1983, CAN.J.CHEM., 61, 2299' pucglr10 all_ribose_gamma 1 4.60 0.006-0.010A N-6--(N-GLYCYLCARBONYL)ADENOSINE 'R.PARTHASARATHY,J.M.OHRT,G.B.CHHEDA 1977, BIOCHEMISTRY, 16, 4999' taljar all_ribose_gamma 1 3.60 0.001-0.005A '4-AMINO-5-METHYL-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE 5-METHYLCYTIDINE' ;N.PADMAJA,S.RAMAKUMAR,M.A.VISWAMITRA 1991, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 47, 1445 ; taljar all_ribose_gamma 2 3.60 0.001-0.005A '4-AMINO-5-METHYL-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE 5-METHYLCYTIDINE' ;N.PADMAJA,S.RAMAKUMAR,M.A.VISWAMITRA 1991, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 47, 1445 ; uroame all_ribose_gamma 1 4.00 0.006-0.010A 'URIDINE-5-OXYACETIC ACID METHYL ESTER MONOHYDRATE' 'K.MORIKAWA,K.TORII,Y.IITAKA,M.TSUBOI 1975, ACTA CRYSTALLOGR.,SECT.B, 31, 1004' . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . amurid ribose_C2endo_pyrimidine 1 7.60 0.006-0.010A . . bibxit ribose_C2endo_pyrimidine 1 5.10 0.006-0.010A . . cekluz ribose_C2endo_pyrimidine 1 4.90 0.001-0.005A . . clurid10 ribose_C2endo_pyrimidine 1 3.15 0.001-0.005A . . daurid01 ribose_C2endo_pyrimidine 1 3.95 0.001-0.005A . . dmurid ribose_C2endo_pyrimidine 1 5.80 0.006-0.010A . . gicmou ribose_C2endo_pyrimidine 1 4.10 0.001-0.005A . . gicmou ribose_C2endo_pyrimidine 2 4.10 0.001-0.005A . . hxurid ribose_C2endo_pyrimidine 1 2.60 0.001-0.005A . . kurdmp ribose_C2endo_pyrimidine 1 3.50 0.001-0.005A . . lumzrf01 ribose_C2endo_pyrimidine 1 5.90 0.001-0.005A . . lumzrf01 ribose_C2endo_pyrimidine 2 5.90 0.001-0.005A . . palaur10 ribose_C2endo_pyrimidine 1 6.70 0.006-0.010A . . suromm ribose_C2endo_pyrimidine 1 2.50 0.006-0.010A . . uridmp10 ribose_C2endo_pyrimidine 1 5.10 0.006-0.010A . . zaytic ribose_C2endo_pyrimidine 1 3.45 0.001-0.005A . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_syn . . . . . . C2endo_pyrimidine_syn . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_4 . . . . . #