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Flipped Out Bases
NDBID: UDJ031 Full Atlas Entry for UDJ031
More Examples of Flipped out Bases
Introduction to Nucleic Acids

Features
B-DNA double helix, flipped-out bases, base triplet

Compound name
5'-d(CpGpCpApApTpTpGpCpG)-3'

Sequence in asymmetric unit
  • Chain A: C G C A A T T G C G

  • Citation
    N. Spink, C.M. Nunn, J. Vojtechovsky, H.M. Berman, S. Neidle
    Crystal Structure of a DNA Decamer Showing a Novel Pseudo Four-Way Helix-Helix Junction Proc. Nat. Acad. Sci. USA, 92, pp. 10767-10771, 1995.


    Other Examples of Flipped out Bases
       
    DDF060 L.A. Lipscomb et al.
    5'-d(CpGpApTpCpG)-3', Cu(II)meso-(4-N-tetramethylpyridyl)porphyrin

    UDF025 L. Malinina et al.
    5'-d(CpCpGpCpGpG)-3'

    UDJ031 N. Spink et al.
    5'-d(CpGpCpApApTpTpGpCpG)-3'

    UDJ032 C.M. Nunn and S. Neidle
    5'-d(ApGpGpCpApTpGpCpCpT)-3'

    UDJB44 C.M. Nunn
    5'-d(ApGpGpC+pApTpGpCpCpT)-3'

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