<?xml version="1.0"?>
<!DOCTYPE rnaml SYSTEM "rnaml.dtd">

<rnaml version="1.0">

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      <sequence>
         <numbering-system id="1" used-in-file="false">
            <numbering-range>
               <start>1</start>
               <end>9</end>
            </numbering-range>
         </numbering-system>
         <numbering-table length="9" comment="sequence number in pdb file">
            1    2    3    4    5    6    7    8    9 
         </numbering-table>
         <seq-data>
            auggtgcuc
         </seq-data>
         <seq-annotation comment="?">
            <modification>
               <base-id><position>1</position></base-id>
               <modified-type> DA</modified-type>
            </modification>
            <modification>
               <base-id><position>2</position></base-id>
               <modified-type> DT</modified-type>
            </modification>
            <modification>
               <base-id><position>3</position></base-id>
               <modified-type> DG</modified-type>
            </modification>
            <modification>
               <base-id><position>4</position></base-id>
               <modified-type> DG</modified-type>
            </modification>
            <modification>
               <base-id><position>5</position></base-id>
               <modified-type>T3P</modified-type>
            </modification>
            <modification>
               <base-id><position>6</position></base-id>
               <modified-type> DG</modified-type>
            </modification>
            <modification>
               <base-id><position>7</position></base-id>
               <modified-type> DC</modified-type>
            </modification>
            <modification>
               <base-id><position>8</position></base-id>
               <modified-type> DT</modified-type>
            </modification>
            <modification>
               <base-id><position>9</position></base-id>
               <modified-type> DC</modified-type>
            </modification>
         </seq-annotation>
      </sequence>
      <structure>
         <model id="?">
            <model-info>
               <method>Crystallography ?</method>
               <resolution>? Angstroms</resolution>
            </model-info>
            <base>
               <position>1</position>
               <base-type>a</base-type>
               <atom serial="6">
                  <atom-type> O3'</atom-type>
                     <coordinates>13.625 -3.629 -3.902</coordinates>
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            <base>
               <position>2</position>
               <base-type>u</base-type>
               <atom serial="22">
                  <atom-type> P  </atom-type>
                     <coordinates>13.010 -4.403 -2.618</coordinates>
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               <atom serial="30">
                  <atom-type> O3'</atom-type>
                     <coordinates>12.767 -1.456 2.316</coordinates>
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            </base>
            <base>
               <position>3</position>
               <base-type>g</base-type>
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                  <atom-type> P  </atom-type>
                     <coordinates>11.967 -1.779 3.689</coordinates>
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               <atom serial="52">
                  <atom-type> O3'</atom-type>
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               <position>4</position>
               <base-type>g</base-type>
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                  <atom-type> P  </atom-type>
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               <atom serial="76">
                  <atom-type> O3'</atom-type>
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               <position>5</position>
               <base-type>t</base-type>
               <atom serial="92">
                  <atom-type> P  </atom-type>
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                  <atom-type> O3'</atom-type>
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               <base-type>g</base-type>
               <atom serial="115">
                  <atom-type> P  </atom-type>
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                  <atom-type> O3'</atom-type>
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                  <atom-type> P  </atom-type>
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                  <atom-type> O3'</atom-type>
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               <base-type>u</base-type>
               <atom serial="160">
                  <atom-type> P  </atom-type>
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               <position>9</position>
               <base-type>c</base-type>
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                  <atom-type> P  </atom-type>
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               <atom serial="190">
                  <atom-type> O3'</atom-type>
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            <str-annotation>
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                  <base-id><position>2</position></base-id>
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                  <base-id><position>3</position></base-id>
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         </model>
      </structure>
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   <molecule id="2">
      <sequence>
         <numbering-system id="2" used-in-file="false">
            <numbering-range>
               <start>1</start>
               <end>9</end>
            </numbering-range>
         </numbering-system>
         <numbering-table length="9" comment="sequence number in pdb file">
           10 
           11   12   13   14   15   16   17   18 
         </numbering-table>
         <seq-data>
            G AGCACCAU
         </seq-data>
         <seq-annotation comment="?">
         </seq-annotation>
      </sequence>
      <structure>
         <model id="?">
            <model-info>
               <method>Crystallography ?</method>
               <resolution>? Angstroms</resolution>
            </model-info>
            <base>
               <position>1</position>
               <base-type>G</base-type>
               <atom serial="209">
                  <atom-type> O3'</atom-type>
                     <coordinates>0.426 -13.860 4.458</coordinates>
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            </base>
            <base>
               <position>2</position>
               <base-type>A</base-type>
               <atom serial="227">
                  <atom-type> P  </atom-type>
                     <coordinates>1.149 -13.003 3.295</coordinates>
               </atom>
               <atom serial="235">
                  <atom-type> O3'</atom-type>
                     <coordinates>-0.896 -12.606 -1.486</coordinates>
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            <base>
               <position>3</position>
               <base-type>G</base-type>
               <atom serial="251">
                  <atom-type> P  </atom-type>
                     <coordinates>-0.153 -11.567 -2.473</coordinates>
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               <atom serial="259">
                  <atom-type> O3'</atom-type>
                     <coordinates>-2.648 -8.527 -5.857</coordinates>
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            </base>
            <base>
               <position>4</position>
               <base-type>C</base-type>
               <atom serial="276">
                  <atom-type> P  </atom-type>
                     <coordinates>-1.737 -7.343 -6.475</coordinates>
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               <atom serial="284">
                  <atom-type> O3'</atom-type>
                     <coordinates>-3.853 -2.784 -7.935</coordinates>
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               <position>5</position>
               <base-type>A</base-type>
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                  <atom-type> P  </atom-type>
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                  <atom-type> P  </atom-type>
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               <base-type>C</base-type>
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   <interactions>
            <str-annotation>
               <base-pair comment="?">
                  <base-id-5p>
                     <base-id>
                        <molecule-id ref="1"/><position>1</position>
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                  </base-id-5p>
                  <base-id-3p>
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                  <edge-5p>-</edge-5p>
                  <edge-3p>-</edge-3p>
                  <bond-orientation>c</bond-orientation>
               </base-pair>
               <base-pair comment="?">
                  <base-id-5p>
                     <base-id>
                        <molecule-id ref="1"/><position>2</position>
                     </base-id>
                  </base-id-5p>
                  <base-id-3p>
                     <base-id>
                        <molecule-id ref="2"/><position>8</position>
                     </base-id>
                  </base-id-3p>
                  <edge-5p>-</edge-5p>
                  <edge-3p>-</edge-3p>
                  <bond-orientation>c</bond-orientation>
               </base-pair>
               <base-pair comment="?">
                  <base-id-5p>
                     <base-id>
                        <molecule-id ref="1"/><position>3</position>
                     </base-id>
                  </base-id-5p>
                  <base-id-3p>
                     <base-id>
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                  <edge-5p>+</edge-5p>
                  <edge-3p>+</edge-3p>
                  <bond-orientation>c</bond-orientation>
               </base-pair>
               <base-pair comment="?">
                  <base-id-5p>
                     <base-id>
                        <molecule-id ref="1"/><position>4</position>
                     </base-id>
                  </base-id-5p>
                  <base-id-3p>
                     <base-id>
                        <molecule-id ref="2"/><position>6</position>
                     </base-id>
                  </base-id-3p>
                  <edge-5p>+</edge-5p>
                  <edge-3p>+</edge-3p>
                  <bond-orientation>c</bond-orientation>
               </base-pair>
               <base-pair comment="?">
                  <base-id-5p>
                     <base-id>
                        <molecule-id ref="1"/><position>5</position>
                     </base-id>
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                  <base-id-3p>
                     <base-id>
                        <molecule-id ref="2"/><position>5</position>
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                  <edge-5p>-</edge-5p>
                  <edge-3p>-</edge-3p>
                  <bond-orientation>c</bond-orientation>
               </base-pair>
               <base-pair comment="?">
                  <base-id-5p>
                     <base-id>
                        <molecule-id ref="1"/><position>6</position>
                     </base-id>
                  </base-id-5p>
                  <base-id-3p>
                     <base-id>
                        <molecule-id ref="2"/><position>4</position>
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                  </base-id-3p>
                  <edge-5p>+</edge-5p>
                  <edge-3p>+</edge-3p>
                  <bond-orientation>c</bond-orientation>
               </base-pair>
               <base-pair comment="?">
                  <base-id-5p>
                     <base-id>
                        <molecule-id ref="1"/><position>7</position>
                     </base-id>
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                  <base-id-3p>
                     <base-id>
                        <molecule-id ref="2"/><position>3</position>
                     </base-id>
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                  <edge-5p>+</edge-5p>
                  <edge-3p>+</edge-3p>
                  <bond-orientation>c</bond-orientation>
               </base-pair>
               <base-pair comment="?">
                  <base-id-5p>
                     <base-id>
                        <molecule-id ref="1"/><position>8</position>
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                  <base-id-3p>
                     <base-id>
                        <molecule-id ref="2"/><position>2</position>
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                  <edge-5p>-</edge-5p>
                  <edge-3p>-</edge-3p>
                  <bond-orientation>c</bond-orientation>
               </base-pair>
               <base-pair comment="?">
                  <base-id-5p>
                     <base-id>
                        <molecule-id ref="1"/><position>9</position>
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                  </base-id-5p>
                  <base-id-3p>
                     <base-id>
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                  <edge-5p>+</edge-5p>
                  <edge-3p>+</edge-3p>
                  <bond-orientation>c</bond-orientation>
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               <helix id="H1">
                  <base-id-5p>
                     <base-id>
                        <molecule-id ref="1"/><position>1</position>
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                  <base-id-3p>
                     <base-id>
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            </str-annotation>
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