PDB ID: 1C2Q
Title:
SOLUTION STRUCTURE OF A DNA.RNA HYBRID CONTAINING AN ALPHAT-ANOMERIC THYMIDINE AND POLARITY REVERSALS
Molecular Description:
5'-D(ApTpGpGp(T3P)pGpCpTpC)-3'
5'-R(GpApGpCpApCpCpApU)-3'
Nucleic Acid Sequence:
Chain
A:
(DA) (DT) (DG) (DG) (T3P) (DG) (DC) (DT) (DC)
Chain
B:
G A G C A C C A U
Primary Citation:
Aramini, J.M., Germann, M.W.
Solution structure of a DNA.RNA hybrid containing an alpha-anomeric thymidine and polarity reversals: d(ATGG-3'-3'-alphaT-5'-5'-GCTC). r(gagcaccau).
Biochemistry
,
38
, pp. 15448 - 15458, 1999.
Experimental Information:
SOLUTION NMR
Number of Models:
1 Model
Sample Details:
0.89 MM HYBRID, 50 MM NACL, 10 MM PHOSPHATE BUFFER, 0.5 MM EDTA, PH* 6.6, D2O
Structure
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Coordinates
Coordinates (pdb format, Unix compressed(.gz))
Coordinates (cif format, Unix compressed(.gz))
NMR Restraints (cif format, Unix compressed(.gz))
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Header only (xml format, GNU compressed(.gz))
Derivative Data
Nucleic Acid Backbone Torsions
Base Pair Parameters
Base Pair Step Parameters
Hydrogen Bonding Classification
Links
The RCSB Protein Data Bank:
1C2Q
PubMed:
10569927
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