PDB ID: 1DK6


Title:NMR STRUCTURE ANALYSIS OF THE DNA NINE BASE PAIR DUPLEX D(CATGAGTAC) D(GTAC(NP3)CATG)
Molecular Description:5'-D(CpApTpGpApGpTpApC)-3'
5'-D(GpTpApCp(NP3)pCpApTpG)-3'
Nucleic Acid Sequence:
ChainA:(DC) (DA) (DT) (DG) (DA) (DG) (DT) (DA) (DC)
ChainB:(DG) (DT) (DA) (DC) (NP3) (DC) (DA) (DT) (DG)
Primary Citation:Klewer, D.A., Hoskins, A., Zhang, P., Davisson, V.J., Bergstrom, D.E., LiWang, A.C.
NMR structure of a DNA duplex containing nucleoside analog 1-(2'-deoxy-beta-D-ribofuranosyl)-3-nitropyrrole and the structure of the unmodified control.
Nucleic Acids Res. , 28, pp. 4514 - 4522, 2000.
Experimental Information:SOLUTION NMR
Number of Models:1 Model
Sample Details: 4.5MM DUPLEX; 100MM NACL, 10MM NAOP, 1MM EDTA, PH 7

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Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1DK6

PubMed: 11071940




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