<?xml version="1.0"?>
<!DOCTYPE rnaml SYSTEM "rnaml.dtd">

<rnaml version="1.0">

   <molecule id="1">
      <sequence>
         <numbering-system id="1" used-in-file="false">
            <numbering-range>
               <start>1</start>
               <end>24</end>
            </numbering-range>
         </numbering-system>
         <numbering-table length="24" comment="sequence number in pdb file">
            1    2    3    4    5    6    7    8    9   10 
           11   12   13   14   15   16   17   18   19   20 
           21   22   23   24 
         </numbering-table>
         <seq-data>
            GUGCGAAGAC GAAAGUCCGA GCGC
         </seq-data>
         <seq-annotation comment="?">
            <segment>
               <seg-name>LOOP1</seg-name>
               <base-id-5p><base-id><position>11</position></base-id></base-id-5p>
               <base-id-3p><base-id><position>14</position></base-id></base-id-3p>
            </segment>
         </seq-annotation>
      </sequence>
      <structure>
         <model id="?">
            <model-info>
               <method>Crystallography ?</method>
               <resolution>? Angstroms</resolution>
            </model-info>
            <base>
               <position>1</position>
               <base-type>G</base-type>
               <atom serial="1">
                  <atom-type> P  </atom-type>
                     <coordinates>225.816 -101.402 -92.157</coordinates>
               </atom>
               <atom serial="7">
                  <atom-type> O3'</atom-type>
                     <coordinates>230.376 -100.000 -93.292</coordinates>
               </atom>
            </base>
            <base>
               <position>2</position>
               <base-type>U</base-type>
               <atom serial="24">
                  <atom-type> P  </atom-type>
                     <coordinates>230.169 -98.882 -94.444</coordinates>
               </atom>
               <atom serial="32">
                  <atom-type> O3'</atom-type>
                     <coordinates>231.760 -98.595 -99.387</coordinates>
               </atom>
            </base>
            <base>
               <position>3</position>
               <base-type>G</base-type>
               <atom serial="46">
                  <atom-type> P  </atom-type>
                     <coordinates>230.825 -97.444 -100.052</coordinates>
               </atom>
               <atom serial="54">
                  <atom-type> O3'</atom-type>
                     <coordinates>229.535 -96.367 -105.109</coordinates>
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            </base>
            <base>
               <position>4</position>
               <base-type>C</base-type>
               <atom serial="71">
                  <atom-type> P  </atom-type>
                     <coordinates>228.196 -95.454 -105.188</coordinates>
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               <atom serial="79">
                  <atom-type> O3'</atom-type>
                     <coordinates>224.037 -96.083 -108.464</coordinates>
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            </base>
            <base>
               <position>5</position>
               <base-type>G</base-type>
               <atom serial="93">
                  <atom-type> P  </atom-type>
                     <coordinates>222.837 -95.043 -108.137</coordinates>
               </atom>
               <atom serial="101">
                  <atom-type> O3'</atom-type>
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            </base>
            <base>
               <position>6</position>
               <base-type>A</base-type>
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                  <atom-type> P  </atom-type>
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               <atom serial="126">
                  <atom-type> O3'</atom-type>
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            <base>
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               <base-type>A</base-type>
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                  <atom-type> P  </atom-type>
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               <atom serial="150">
                  <atom-type> O3'</atom-type>
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               <base-type>G</base-type>
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               <atom serial="174">
                  <atom-type> O3'</atom-type>
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            <base>
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               <base-type>A</base-type>
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                  <atom-type> P  </atom-type>
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               <atom serial="199">
                  <atom-type> O3'</atom-type>
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               <base-type>C</base-type>
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                  <atom-type> P  </atom-type>
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               <atom serial="223">
                  <atom-type> O3'</atom-type>
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            <base>
               <position>11</position>
               <base-type>G</base-type>
               <atom serial="237">
                  <atom-type> P  </atom-type>
                     <coordinates>201.402 -85.144 -93.979</coordinates>
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               <atom serial="245">
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               <base-type>A</base-type>
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                  <atom-type> P  </atom-type>
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                  <atom-type> O3'</atom-type>
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               <base-type>A</base-type>
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               <base-type>C</base-type>
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                  <atom-type> O3'</atom-type>
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               <position>19</position>
               <base-type>G</base-type>
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                  <atom-type> P  </atom-type>
                     <coordinates>216.939 -96.164 -91.636</coordinates>
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                  <atom-type> O3'</atom-type>
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               <base-type>A</base-type>
               <atom serial="450">
                  <atom-type> P  </atom-type>
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                  <atom-type> O3'</atom-type>
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               <base-type>G</base-type>
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               <base-type>C</base-type>
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                  <atom-type> P  </atom-type>
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                  <atom-type> O3'</atom-type>
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            <str-annotation>
               <base-pair comment="?">
                  <base-id-5p>
                     <base-id><position>1</position></base-id>
                  </base-id-5p>
                  <base-id-3p>
                     <base-id><position>24</position></base-id>
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                  <edge-5p>+</edge-5p>
                  <edge-3p>+</edge-3p>
                  <bond-orientation>c</bond-orientation>
               </base-pair>
               <base-pair comment="?">
                  <base-id-5p>
                     <base-id><position>2</position></base-id>
                  </base-id-5p>
                  <base-id-3p>
                     <base-id><position>23</position></base-id>
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                  <edge-3p>W</edge-3p>
                  <bond-orientation>c</bond-orientation>
               </base-pair>
               <base-pair comment="?">
                  <base-id-5p>
                     <base-id><position>3</position></base-id>
                  </base-id-5p>
                  <base-id-3p>
                     <base-id><position>22</position></base-id>
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                  <edge-5p>+</edge-5p>
                  <edge-3p>+</edge-3p>
                  <bond-orientation>c</bond-orientation>
               </base-pair>
               <base-pair comment="?">
                  <base-id-5p>
                     <base-id><position>4</position></base-id>
                  </base-id-5p>
                  <base-id-3p>
                     <base-id><position>21</position></base-id>
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                  <edge-5p>+</edge-5p>
                  <edge-3p>+</edge-3p>
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               <base-pair comment="?">
                  <base-id-5p>
                     <base-id><position>5</position></base-id>
                  </base-id-5p>
                  <base-id-3p>
                     <base-id><position>20</position></base-id>
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                  <edge-5p>S</edge-5p>
                  <edge-3p>H</edge-3p>
                  <bond-orientation>t</bond-orientation>
               </base-pair>
               <base-pair comment="?">
                  <base-id-5p>
                     <base-id><position>6</position></base-id>
                  </base-id-5p>
                  <base-id-3p>
                     <base-id><position>19</position></base-id>
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                  <edge-5p>H</edge-5p>
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                  <bond-orientation>t</bond-orientation>
               </base-pair>
               <base-pair comment="?">
                  <base-id-5p>
                     <base-id><position>7</position></base-id>
                  </base-id-5p>
                  <base-id-3p>
                     <base-id><position>18</position></base-id>
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                  <edge-5p>W</edge-5p>
                  <edge-3p>W</edge-3p>
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               <base-pair comment="?">
                  <base-id-5p>
                     <base-id><position>8</position></base-id>
                  </base-id-5p>
                  <base-id-3p>
                     <base-id><position>17</position></base-id>
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                  <edge-5p>+</edge-5p>
                  <edge-3p>+</edge-3p>
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               </base-pair>
               <base-pair comment="?">
                  <base-id-5p>
                     <base-id><position>9</position></base-id>
                  </base-id-5p>
                  <base-id-3p>
                     <base-id><position>16</position></base-id>
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                  <edge-5p>-</edge-5p>
                  <edge-3p>-</edge-3p>
                  <bond-orientation>c</bond-orientation>
               </base-pair>
               <base-pair comment="?">
                  <base-id-5p>
                     <base-id><position>10</position></base-id>
                  </base-id-5p>
                  <base-id-3p>
                     <base-id><position>15</position></base-id>
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                  <edge-5p>+</edge-5p>
                  <edge-3p>+</edge-3p>
                  <bond-orientation>c</bond-orientation>
               </base-pair>
               <base-pair comment="?">
                  <base-id-5p>
                     <base-id><position>11</position></base-id>
                  </base-id-5p>
                  <base-id-3p>
                     <base-id><position>15</position></base-id>
                  </base-id-3p>
                  <edge-5p>!</edge-5p>
                  <edge-3p>!</edge-3p>
                  <bond-orientation>!</bond-orientation>
               </base-pair>
               <base-pair comment="?">
                  <base-id-5p>
                     <base-id><position>11</position></base-id>
                  </base-id-5p>
                  <base-id-3p>
                     <base-id><position>14</position></base-id>
                  </base-id-3p>
                  <edge-5p>!</edge-5p>
                  <edge-3p>!</edge-3p>
                  <bond-orientation>!</bond-orientation>
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               <helix id="H1">
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                  </base-id-5p>
                  <base-id-3p>
                     <base-id><position>24</position></base-id>
                  </base-id-3p>
                  <length>10</length>
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               <single-strand>
                  <segment>
                     <seg-name>SG1</seg-name>
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                     <base-id-3p><base-id><position>14</position></base-id></base-id-3p>
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               </single-strand>
            </str-annotation>
            <secondary-structure-display comment="x,y coodinates">
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                  <coordinates>6.764 200.063</coordinates>
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   <interactions>
            <str-annotation>
            </str-annotation>
   </interactions>
</rnaml>
