PDB ID: 1G5D
Title:
NMR STRUCTURE OF AN OLIGONUCLEOTIDE CONTAINING AN ABASIC SITE: ALPHA ANOMER
Molecular Description:
5'-D(CpCpApApApGp(D1P)pApCpTpGpGpG)-3'
5'-D(CpCpCpApGpTpApCpTpTpTpGpG)-3'
Nucleic Acid Sequence:
Chain
A:
Click here for sequence.
Chain
B:
Click here for sequence.
Primary Citation:
Hoehn, S.T., Turner, C.J., Stubbe, J.
Solution structure of an oligonucleotide containing an abasic site: evidence for an unusual deoxyribose conformation.
Nucleic Acids Res.
,
29
, pp. 3413 - 3423, 2001.
Experimental Information:
SOLUTION NMR
Number of Models:
10 Structures
Sample Details:
2.5 mM abasic site containing duplex oligonucleotide; 10 mM sodium phosphate buffer D2O
Representative Model
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Coordinates
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Coordinates (cif format, Unix compressed(.gz))
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Derivative Data
Nucleic Acid Backbone Torsions
Base Pair Parameters
Base Pair Step Parameters
Hydrogen Bonding Classification
Links
The RCSB Protein Data Bank:
1G5D
PubMed:
11504879
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