PDB ID: 1JDG


Title:SOLUTION STRUCTURE OF A TRANS-OPENED (10S)-DA ADDUCT OF (+)-(7S,8R,9S,10R)-7,8-DIHYDROXY-9,10-EPOXY-7,8,9,10-TETRAHYDROBENZO[A]PYRENE IN A FULLY COMPLEMENTARY DNA DUPLEX
Molecular Description:BENZO[A]PYRENE ADDUCT IN DNA DUPLEX
Nucleic Acid Sequence:
ChainA:(DC) (DG) (DG) (DT) (DC) (DA) (DC) (DG) (DA) (DG) (DG)
ChainB:(DC) (DC) (DT) (DC) (DG) (DT) (DG) (DA) (DC) (DC) (DG)
Primary Citation:Pradhan, P., Tirumala, S., Liu, X., Sayer, J.M., Jerina, D.M., Yeh, H.J.
Solution structure of a trans-opened (10S)-dA adduct of (+)-(7S,8R,9S,10R)-7,8-dihydroxy-9,10-epoxy-7,8,9,10-tetrahydrobenzo[a]pyrene in a fully complementary DNA duplex: evidence for a major syn conformation.
Biochemistry , 40, pp. 5870 - 5881, 2001.
Experimental Information:SOLUTION NMR
Number of Models:1 Model
Sample Details: 2mM DNA

Structure
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Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1JDG

PubMed: 11352722




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