PDB ID: 1KVH


Title:NCSI-GB-BULGE-DNA COMPLEX INDUCED FORMATION OF A DNA BULGE STRUCTURE BY A MOLECULAR WEDGE LIGAND-POST-ACTIVATED NEOCARZINOSTATIN CHROMOPHORE
Molecular Description:5'-D(CpCpCpGpApTpGpC)-3'
Nucleic Acid Sequence:
ChainA:(DC) (DC) (DC) (DG) (DA) (DT) (DG) (DC)
ChainB:(DG) (DC) (DA) (DA) (DT) (DT) (DC) (DG) (DG) (DG)
Primary Citation:Gao, X., Stassinopoulos, A., Ji, J., Kwon, Y., Bare, S., Goldberg, I.H.
Induced formation of a DNA bulge structure by a molecular wedge ligand-postactivated neocarzinostatin chromophore.
Biochemistry , 41, pp. 5131 - 5143, 2002.
Experimental Information:SOLUTION NMR
Number of Models:7 Structures
Sample Details: ca. 1 mM NCSi-gb-bulge-DNA complex; 0.1 M NaCl, 10 mM sodium phosphate, and 0.1 mM EDTA buffer (pH 6.4); 90% H2O, 10% D2O 90% H2O, 10% D2O

Representative Model
Other Views

Ensemble
Enlarge Representative Model



Coordinates

Coordinates (pdb format, Unix compressed(.gz))

Coordinates (cif format, Unix compressed(.gz))

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1KVH

PubMed: 11955061




ndbadmin@ndbserver.rutgers.edu
©1995-2013 The Nucleic Acid Database Project
Rutgers, The State University of New Jersey