PDB ID: 1NTQ


Title:5'(DCCUCCUU)3':3'(RAGGAGGAAA)5'
Molecular Description:5'-R(ApApApGpGpApGpGpA)-3'/5'-D(CpCpUpCp
CpUpU)-3'
Nucleic Acid Sequence:
ChainA: A A A G G A G G A
ChainB: (DC) (DC) (DU) (DC) (DC) (DU) (DU)
Primary Citation:Znosko, B.M., Barnes III, T.W., Krugh, T.R., Turner, D.H.
NMR Studies of DNA Single Strands and DNA:RNA Hybrids With and Without 1-Propynylation at C5 of Oligopyrimidines
J.Am.Chem.Soc. , 125, pp. 6090 - 6097, 2003.
Experimental Information:NMR
Number of Models:1 Model
Sample Details: ~1mM hybrid, 80 mM NaCl, 10 mM phosphate buffer, 0.5 mM EDTA, 90% H2O, 10% D2O 90% H2O, 10% D2O

Minimized Average Structure
Other Views

RNA View
RNAML File
Enlarge Minimized Average Structure



Coordinates

Coordinates (pdb format, Unix compressed(.gz))

Coordinates (cif format, Unix compressed(.gz))

NMR Restraints (cif format, Unix compressed(.gz))

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1NTQ

PubMed: 12785839




ndbadmin@ndbserver.rutgers.edu
©1995-2007 The Nucleic Acid Database Project
Rutgers, The State University of New Jersey