PDB ID: 1U6O


Title:MISPAIRING OF A SITE-SPECIFIC MAJOR GROOVE (2S,3S)-N6-(2,3,4-TRIHYDROXYBUTYL)-2-DEOXYADENOSYL DNA ADDUCT OF BUTADIENE DIOL EPOXIDE WITH DEOXYGUANOSINE: FORMATION OF A DA(ANTI)DG(ANTI) PAIRING INTERACTION
Molecular Description:5'-D(CpGpGpApCp(2BU)pApGpApApG)-3'
Nucleic Acid Sequence:
ChainA:(DC) (DG) (DG) (DA) (DC) (2BU) (DA) (DG) (DA) (DA) (DG)
ChainB:(DC) (DT) (DT) (DC) (DT) (DG) (DG) (DT) (DC) (DC) (DG)
Primary Citation:Scholdberg, T.A., Nechev, L.V., Merritt, W.K., Harris, T.M., Harris, C.M., Lloyd, R.S., Stone, M.P.
Mispairing of a Site Specific Major Groove (2S,3S)-N6-(2,3,4-Trihydroxybutyl)-2'-deoxyadenosyl DNA Adduct of Butadiene Diol Epoxide with Deoxyguanosine: Formation of a dA(anti)dG(anti) Pairing Interaction.
CHEM.RES.TOXICOL. , 18, pp. 145 - 153, 2005.
Experimental Information:SOLUTION NMR
Number of Models:1 Model

Structure
Other Views

Enlarge Structure



Coordinates

Coordinates (pdb format, Unix compressed(.gz))

Coordinates (cif format, Unix compressed(.gz))

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1U6O

PubMed: 15720118




ndbadmin@ndbserver.rutgers.edu
©1995-2013 The Nucleic Acid Database Project
Rutgers, The State University of New Jersey