NDB ID: AD0004


Title:HIGH RESOLUTION A-DNA CRYSTAL STRYCTURES OF D(AGGGGCCCCT): AN A-DNA MODEL OF POLY(DG).POLY(DC)
Molecular Description:5'-D(ApGpGpGpGpCpCpCpCpT)-3'
Structural Features:A DOUBLE HELIX
Nucleic Acid Sequence:
ChainA: (DA) (DG) (DG) (DG) (DG) (DC) (DC) (DC) (DC) (DT)
Primary Citation:Gao, Y.G., Robinson, H., Wang, A.H.
High-resolution A-DNA crystal structures of d(AGGGGCCCCT). An A-DNA model of poly(dG) x poly(dC).
Eur.J.Biochem. , 261, pp. 413 - 420, 1999.
Experimental Information:X-RAY DIFFRACTION
Space Group: 61   2
Cell Constants:
a = 32.765b = 32.765c = 77.754(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, SITTING DROP
Drop:SODIUM CACODYLATE, MPD, MgCl2
Reservoir:MPD
Refinement:The structure was refined using the X-PLOR 3.851 program. The R value is 23.6 for 2775 reflections in the resolution range 6.0 to 1.50 Ångstroms with Fobs > 4.0 sigma(Fobs).

Biological Unit 1
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 441D

PubMed: 10215851




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