NDB ID: AD0010


Title:ALTERNATION OF DNA AND SOLVENT LAYERS IN THE A FORM OF D(GGCGCC) OBTAINED BY ETHANOL CRYSTALLIZATION
Molecular Description:5'-D(GpGpCpGpCpC)-3'
Structural Features:A DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA, B, C, D, E, F: (DG) (DG) (DC) (DG) (DC) (DC)
Primary Citation:Urpi, L., Navaza, J., Subirana, J.A.
Alternation of DNA and solvent layers in the A form of d(GGCGCC) obtained by ethanol crystallization.
J.Biomol.Struct.Dyn. , 18, pp. 363 - 369, 2000.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21
Cell Constants:
a = 46.149b = 36.900c = 110.030(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, SITTING DROP
Drop:ethanol, magnesium chloride, sodium cacodylate, tetra-arginine, spermine tetrachloride
Refinement:The structure was refined using the SHELXL-97 program. The R value is 18.75 for 2839 reflections in the resolution range 8.0 to 2.3 Ångstroms with I > 2.0 sigma(I).

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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)123

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1G00

PubMed: 11149513




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