NDB ID: AD0020


Title:A-DNA DECAMER GCGTA(TLN)ACGC
Molecular Description:5'-D(GpCpGpTpAp(TLN)pApCpGpC)-3'
Structural Features:A DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA, B: (DG) (DC) (DG) (DT) (DA) (TLN) (DA) (DC) (DG) (DC)
Primary Citation:Egli, M., Minasov, G., Teplova, M., Kumar, R., Wengel, J.
X-ray crystal structure of a locked nucleic acid (LNA) duplex composed of a palindromic 10-mer DNA strand containing one LNA thymine monomer
J.Chem.Soc.,Chem.Commun. pp. 651 - 652, 2001.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 26.140b = 43.960c = 45.800(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, HANGING DROP
Drop:KCl, Sodium Cacodylate, Spermine, MPD
Reservoir:MPD
Refinement:The structure was refined using the CNS program. The R value is 16.7 for 10660 reflections in the resolution range 17.0 to 1.40 Ångstroms with I > 0.0 sigma(I).

Biological Unit 1
Other Views
Asymmetric Unit
Crystal Packing
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1I5W

PubMed: -1




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