NDB ID: AD0025


Title:DIRECT OBSERVATION OF A CYTOSINE ANALOG THAT FORMS FIVE HYDROGEN BONDS TO GUANOSINE; GUANYL G-CLAMP
Molecular Description:5'-D(Gp(GCK)pGpTpApTpApCpGpC)-3'
Structural Features:A DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA,B:(DG) (GCK) (DG) (DT) (DA) (DT) (DA) (DC) (DG) (DC)
Primary Citation:Wilds, C.J., Maier, M.A., Tereshko, V., Manoharan, M., Egli, M.
Direct Observation of a Cytosine Analogue that Forms Five Hydrogen Bonds to Guanosine: Guanidino G-Clamp
Angew.Chem.Int.Ed.Engl. , 41, pp. 115 - 117, 2002.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 24.520b = 43.020c = 46.680(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the SHELXL-97 program. The R value is 12.8 for 27320 reflections in the resolution range 10. to 1.0 Ångstroms .

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1KGK

PubMed: 12491456




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