NDB ID: AD0055


Title:13MER-CO
Molecular Description:5'-D(ApTpGpGpGpGpCpGpGpGpGpCpT)-3'
Structural Features:A DOUBLE HELIX, OVERHANGING BASES
Nucleic Acid Sequence:
ChainA:Click here for sequence.
ChainB:Click here for sequence.
Primary Citation:Dohm, J.A., Hsu, M.H., Hwu, J.R., Huang, R.C., Moudrianakis, E.N., Lattman, E.E., Gittis, A.G.
Influence of Ions, Hydration, and the Transcriptional Inhibitor P4N on the Conformations of the Sp1 Binding Site.
J.Mol.Biol. , 349, pp. 731 - 744, 2005.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 38.873b = 43.291c = 47.255(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, HANGING DROP
Refinement:The structure was refined using the CNS program. The R value is 22.3 for 1711 reflections in the resolution range 10.00 to 3.00 Ångstroms with Fobs > 0 sigma(Fobs).

Biological Unit 1
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Asymmetric Unit
Crystal Packing
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1ZJG

PubMed: 15896803




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