NDB ID: ADH020


Title:STRUCTURAL VARIATION IN D(CTCTAGAG). IMPLICATIONS FOR PROTEIN-DNA INTERACTIONS
Molecular Description:5'-D(CpTpCpTpApGpApG)-3'
Structural Features:A DOUBLE HELIX
Nucleic Acid Sequence:
ChainA: (DC) (DT) (DC) (DT) (DA) (DG) (DA) (DG)
Primary Citation:Hunter, W.N., D'Estaintot, B.L., Kennard, O.
Structural variation in d(CTCTAGAG). Implications for protein-DNA interactions.
Biochemistry , 28, pp. 2444 - 2451, 1989.
Experimental Information:X-RAY DIFFRACTION
Space Group: 43   21   2
Cell Constants:
a = 42.520b = 42.520c = 24.330(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, SITTING DROP
Drop:WATER, MPD, Na Cacodylate, MgCl2, Spermine HCl
Reservoir:WATER, MPD
Refinement:The structure was refined using the NUCLSQ program. The R value is 14.7 for 931 reflections in the resolution range 8.000 to 2.150 Ångstroms with I > 1.000 sigma(I).

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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

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Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1D93

PubMed: 2730875




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