NDB ID: ADH039


Title:HIGH RESOLUTION REFINEMENT OF THE HEXAGONAL A-DNA OCTAMER D(GTGTACAC) AT 1.4 ANGSTROMS RESOLUTION
Molecular Description:5'-D(GpTpGpTpApCpApC)-3'
SPERMIDINE
Structural Features:A DOUBLE HELIX
Nucleic Acid Sequence:
ChainA: (DG) (DT) (DG) (DT) (DA) (DC) (DA) (DC)
Primary Citation:Thota, N., Li, X.H., Bingman, C., Sundaralingam, M.
High-resolution refinement of the hexagonal A-DNA octamer d(GTGTACAC) at 1.4 A.
Acta Crystallogr.,Sect.D , 49, pp. 282 - 291, 1993.
Experimental Information:X-RAY DIFFRACTION
Space Group: 61   2
Cell Constants:
a = 32.341b = 32.341c = 78.490(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION
Drop:WATER, MPD, MgCl2, SPERMIDINE
Reservoir:WATER, MPD, MgCl2
Refinement:The structure was refined using the NUCLSQ program. The R value is 19.1 for 3292 reflections in the resolution range 5.000 to 1.450 Ångstroms with Fobs > 2.000 sigma(Fobs).

Biological Unit 1
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1D79

PubMed: 15299533




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