NDB ID: ADH059


Title:ORTHORHOMBIC CRYSTAL STRUCTURE OF THE A-DNA OCTAMER D(GTACGTAC). COMPARISON WITH THE TETRAGONAL STRUCTURE
Molecular Description:5'-D(GpTpApCpGpTpApC)-3'
ORTHORHOMBIC
Structural Features:A DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA, B: (DG) (DT) (DA) (DC) (DG) (DT) (DA) (DC)
Primary Citation:Langlois d'Estaintot, B., Dautant, A., Courseille, C., Precigoux, G.
Orthorhombic crystal structure of the A-DNA octamer d(GTACGTAC). Comparison with the tetragonal structure.
Eur.J.Biochem. , 213, pp. 673 - 682, 1993.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   2
Cell Constants:
a = 38.605b = 50.824c = 21.740(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, SITTING DROP
Drop:WATER, HMD, Na Cacodylate, MgCl2, Spermine HCl
Reservoir:WATER, MPD
Refinement:The structure was refined using the NUCLSQ program. The R value is 16.1 for 1516 reflections in the resolution range 10.000 to 2.190 Ångstroms with Fobs > 4.000 sigma(Fobs).

Biological Unit 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Unit 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 197D

PubMed: 8477741




ndbadmin@ndbserver.rutgers.edu
©1995-2007 The Nucleic Acid Database Project
Rutgers, The State University of New Jersey