NDB ID: ADH078


Title:STRUCTURE OF D(CCTAGGG): COMPARISON WITH NINE ISOMORPHOUS OCTAMER SEQUENCES REVEALS FOUR DISTINCT PATTERNS OF SEQUENCE-DEPENDENT INTERMOLECULAR INTERACTIONS
Molecular Description:5'-D(CpCpCpTpApGpGpG)-3'
Structural Features:A DOUBLE HELIX
Nucleic Acid Sequence:
ChainA:(DC) (DC) (DC) (DT) (DA) (DG) (DG) (DG)
Primary Citation:Tippin, D.B., Sundaralingam, M.
Structure of d(CCCTAGGG): comparison with nine isomorphous octamer sequences reveals four distinct patterns of sequence-dependent intermolecular interactions.
Acta Crystallogr.,Sect.D , 52, pp. 997 - 1003, 1996.
Experimental Information:X-RAY DIFFRACTION
Space Group: 43   21   2
Cell Constants:
a = 42.220b = 42.220c = 24.900(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the X-PLOR program. The R value is 16.4 for 1533 reflections in the resolution range 8.000 to 1.900 Ångstroms with Fobs > 1.000 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 317D

PubMed: 15299609




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