NDB ID: ADHB17


Title:REFINED CRYSTAL STRUCTURE OF AN OCTANUCLEOTIDE DUPLEX WITH I.T MISMATCHED BASE PAIRS
Molecular Description:5'-D(GpGpIpGpCpTpCpC)-3'
Structural Features:A DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA, B: (DG) (DG) (DI) (DG) (DC) (DT) (DC) (DC)
Primary Citation:Cruse, W.B., Aymani, J., Kennard, O., Brown, T., Jack, A.G., Leonard, G.A.
Refined crystal structure of an octanucleotide duplex with I.T. mismatched base pairs.
Nucleic Acids Res. , 17, pp. 55 - 72, 1989.
Experimental Information:X-RAY DIFFRACTION
Space Group: 61
Cell Constants:
a = 45.070b = 45.070c = 45.490(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION
Drop:WATER, Na Cacodylate, MgCl2
Reservoir:WATER
Refinement:The structure was refined using the NUCLSQ program. The R value is 14 for 2853 reflections in the resolution of 1.700 with Fobs > 2.000 sigma(Fobs).

Biological Unit 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Unit 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1D90

PubMed: 2911488




ndbadmin@ndbserver.rutgers.edu
©1995-2007 The Nucleic Acid Database Project
Rutgers, The State University of New Jersey