NDB ID: ADHP36


Title:EFFECT OF A SINGLE 3'-METHYLENE PHOSPHONATE LINKAGE ON THE CONFORMATION OF AN A-DNA OCTAMER DOUBLE HELIX
Molecular Description:5'-D(GpCpCpCp(G31)pGpGpC)-3'
G5 CARRIES A CHARGED
ACHIRAL METHYLENE PHOSPHONATE
Structural Features:A DOUBLE HELIX
Nucleic Acid Sequence:
ChainA:(DG) (DC) (DC) (DC) (G31) (DG) (DG) (DC)
Primary Citation:Heinemann, U., Rudolph, L.N., Alings, C., Morr, M., Heikens, W., Frank, R., Blocker, H.
Effect of a single 3'-methylene phosphonate linkage on the conformation of an A-DNA octamer double helix.
Nucleic Acids Res. , 19, pp. 427 - 433, 1991.
Experimental Information:X-RAY DIFFRACTION
Space Group: 43   21   2
Cell Constants:
a = 43.300b = 43.300c = 24.520(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the NUCLSQ program. The R value is 16.0 for 1197 reflections in the resolution range 6.000 to 2.120 Ångstroms with Fobs > 3.000 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1D26

PubMed: 2011517




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