NDB ID: ADJ022


Title:MOLECULAR STRUCTURE OF AN A-DNA DECAMER D(ACCGGCCGGT)
Molecular Description:5'-D(ApCpCpGpGpCpCpGpGpT)-3'
Structural Features:A DOUBLE HELIX
Nucleic Acid Sequence:
ChainA: (DA) (DC) (DC) (DG) (DG) (DC) (DC) (DG) (DG) (DT)
Primary Citation:Frederick, C.A., Quigley, G.J., Teng, M.K., Coll, M., Van der Marel, G.A., Van Boom, J.H., Rich, A., Wang, A.H.
Molecular structure of an A-DNA decamer d(ACCGGCCGGT).
Eur.J.Biochem. , 181, pp. 295 - 307, 1989.
Experimental Information:X-RAY DIFFRACTION
Space Group: 61   2
Cell Constants:
a = 39.230b = 39.230c = 78.010(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION
Drop:WATER, MPD, Na Cacodylate, MgCl2, SPERMINE
Refinement:The structure was refined using the NUCLSQ program. The R value is 18 for 1434 reflections in the resolution range 20.000 to 2.000 Ångstroms with Fobs > 2.000 sigma(Fobs).

Biological Unit 1
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 1D13

PubMed: 2714286




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