NDB ID: ADJ050


Title:A-DNA DECAMER D(GCGGGCCCGC)-ORTHORHOMBIC CRYSTAL FORM
Molecular Description:5'-D(GpCpGpGpGpCpCpCpGpC)-3'
ORTHORHOMBIC
Structural Features:A DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA,B:(DG) (DC) (DG) (DG) (DG) (DC) (DC) (DC) (DG) (DC)
Primary Citation:Ramakrishnan, B., Sundaralingam, M.
Evidence for crystal environment dominating base sequence effects on DNA conformation: crystal structures of the orthorhombic and hexagonal polymorphs of the A-DNA decamer d(GCGGGCCCGC) and comparison with their isomorphous crystal structures.
Biochemistry , 32, pp. 11458 - 11468, 1993.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 24.900b = 44.840c = 47.970(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the X-PLOR program. The R value is 18.5 for 5450 reflections in the resolution range 8.000 to 1.700 Ångstroms with Fobs > 3.000 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 137D

PubMed: 8218212




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