NDB ID: ADJ050
Title:
A-DNA DECAMER D(GCGGGCCCGC)-ORTHORHOMBIC CRYSTAL FORM
Molecular Description:
5'-D(GpCpGpGpGpCpCpCpGpC)-3'
ORTHORHOMBIC
Structural Features:
A DOUBLE HELIX
Nucleic Acid Sequence:
Chain
s
A,B:
(DG) (DC) (DG) (DG) (DG) (DC) (DC) (DC) (DG) (DC)
Primary Citation:
Ramakrishnan, B., Sundaralingam, M.
Evidence for crystal environment dominating base sequence effects on DNA conformation: crystal structures of the orthorhombic and hexagonal polymorphs of the A-DNA decamer d(GCGGGCCCGC) and comparison with their isomorphous crystal structures.
Biochemistry
,
32
, pp. 11458 - 11468, 1993.
Experimental Information:
X-RAY DIFFRACTION
Space Group:
P
2
1
2
1
2
1
Cell Constants:
a = 24.900
b = 44.840
c = 47.970
(Ångstroms)
= 90.00
= 90.00
= 90.00
(degrees)
Refinement:
The structure was refined using the X-PLOR program. The R value is 18.5 for 5450 reflections in the resolution range 8.000 to 1.700 Ångstroms with Fobs > 3.000 sigma(Fobs).
Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1
Coordinate + Structure Data
Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))
Asymmetric Unit coordinates (cif format, Unix compressed(.gz))
Biological Assembly coordinates (pdb format)
Structure Factors (cif format)
XML |
Complete with coordinates (xml format, GNU compressed(.gz))
XML |
Coordinates only (xml format, GNU compressed(.gz))
XML |
Header only (xml format, GNU compressed(.gz))
Derivative Data
Nucleic Acid Backbone Torsions
Base Pair Parameters
Base Pair Step Parameters
Hydrogen Bonding Classification
Links
The RCSB Protein Data Bank:
137D
PubMed:
8218212
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©1995-2012 The Nucleic Acid Database Project
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