NDB ID: ADJB80


Title:CRYSTAL STRUCTURES OF D(CCGGG(BR)5CCCGG)-ORTHOGONAL FORM
Molecular Description:5'-D(CpCpGpGpGp(CBR)pCpCpGpG)-3'
ORTHOGONAL FORM
Structural Features:A DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA,B:(DC) (DC) (DG) (DG) (DG) (CBR) (DC) (DC) (DG) (DG)
Primary Citation:Tippin, D.B., Sundaralingam, M.
Nine polymorphic crystal structures of d(CCGGGCCCGG), d(CCGGGCCm5CGG), d(Cm5CGGGCCm5CGG) and d(CCGGGCC(Br)5CGG) in three different conformations: effects of spermine binding and methylation on the bending and condensation of A-DNA.
J.Mol.Biol. , 267, pp. 1171 - 1185, 1997.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 24.360b = 44.290c = 48.050(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the X-PLOR program. The R value is 15.0 for 2379 reflections in the resolution range 8.000 to 2.200 Ångstroms with Fobs > 1.000 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 319D

PubMed: 9150405




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