NDB ID: ADJB83
Title:
CRYSTAL STRUCTURES OF D(CCGGGCCM5CGG)-HEXAGONAL FORM
Molecular Description:
5'-D(CpCpGpGpGpCpCp(5CM)pGpG)-3'
HEXAGONAL FORM
Structural Features:
A DOUBLE HELIX
Nucleic Acid Sequence:
Chain
s
A,B:
(DC) (DC) (DG) (DG) (DG) (DC) (DC) (5CM) (DG) (DG)
Primary Citation:
Tippin, D.B., Sundaralingam, M.
Nine polymorphic crystal structures of d(CCGGGCCCGG), d(CCGGGCCm5CGG), d(Cm5CGGGCCm5CGG) and d(CCGGGCC(Br)5CGG) in three different conformations: effects of spermine binding and methylation on the bending and condensation of A-DNA.
J.Mol.Biol.
,
267
, pp. 1171 - 1185, 1997.
Experimental Information:
X-RAY DIFFRACTION
Space Group:
P
6
1
Cell Constants:
a = 55.030
b = 55.030
c = 45.880
(Ångstroms)
= 90.00
= 90.00
= 120.00
(degrees)
Refinement:
The structure was refined using the X-PLOR program. The R value is 17.5 for 1954 reflections in the resolution range 8.000 to 2.500 Ångstroms with Fobs > 1.000 sigma(Fobs).
Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1
Coordinate + Structure Data
Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))
Asymmetric Unit coordinates (cif format, Unix compressed(.gz))
Biological Assembly coordinates (pdb format)
Structure Factors (cif format)
XML |
Complete with coordinates (xml format, GNU compressed(.gz))
XML |
Coordinates only (xml format, GNU compressed(.gz))
XML |
Header only (xml format, GNU compressed(.gz))
Derivative Data
Nucleic Acid Backbone Torsions
Base Pair Parameters
Base Pair Step Parameters
Hydrogen Bonding Classification
Links
The RCSB Protein Data Bank:
322D
PubMed:
9150405
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