NDB ID: ADL045


Title:CRYSTAL AND MOLECULAR STRUCTURE OF THE A-DNA DODECAMER D(CCGTACGTACGG): CHOICE OF FRAGMENT HELICAL AXIS
Molecular Description:5'-D(CpCpGpTpApCpGpTpApCpGpG)-3'
Structural Features:A DOUBLE HELIX
Nucleic Acid Sequence:
ChainA: (DC) (DC) (DG) (DT) (DA) (DC) (DG) (DT) (DA) (DC) (DG) (DG)
Primary Citation:Bingman, C.A., Zon, G., Sundaralingam, M.
Crystal and molecular structure of the A-DNA dodecamer d(CCGTACGTACGG). Choice of fragment helical axis.
J.Mol.Biol. , 227, pp. 738 - 756, 1992.
Experimental Information:X-RAY DIFFRACTION
Space Group: 61   2
Cell Constants:
a = 46.200b = 46.200c = 71.500(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION
Drop:WATER, [CO(NH3)6]3+, SPERMINE, Na Cacodylate
Reservoir:WATER
Refinement:The structure was refined using the NUCLSQ program. The R value is 15 for 1664 reflections in the resolution range 8.000 to 2.500 Ångstroms with Fobs > 2.000 sigma(Fobs).

Biological Unit 1
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 116D

PubMed: 1404387




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