NDB ID: AH0004


Title:DUPLEX [5'-D(GCGTA+TACGC)]2 WITH INCORPORATED 2'-O-METHYL-[TRI(OXYETHYL)] RIBONUCLEOSIDE
Molecular Description:5'-D(GpCpGpTpAp(126)pApCpGpC)-3'
Structural Features:A DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA,B:(DG) (DC) (DG) (DT) (DA) (126) (DA) (DC) (DG) (DC)
Primary Citation:Tereshko, V., Portmann, S., Tay, E.C., Martin, P., Natt, F., Altmann, K.H., Egli, M.
Correlating structure and stability of DNA duplexes with incorporated 2'-O-modified RNA analogues.
Biochemistry , 37, pp. 10626 - 10634, 1998.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 24.640b = 43.620c = 45.470(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the X-PLOR 3.851 program. The R value is 18.9 for 5915 reflections in the resolution range 8.000 to 1.650 Ångstroms with Fobs > 2.000 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
RNA View
RNAML File
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 412D

PubMed: 9692952




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