NDB ID: AH0016


Title:STRUCTURE OF THE HYBRID RNA/DNA R-GCUUCGGC-D[F]U IN PRESENCE OF RH(NH3)6+++
Molecular Description:5'-R(GpCpUpUpCpGpGpC)-D(p(UFP))-3'
Structural Features:A DOUBLE HELIX, OVERHANGING BASES
Nucleic Acid Sequence:
Primary Citation:Cruse, W., Saludjian, P., Neuman, A., Prange, T.
Destabilizing effect of a fluorouracil extra base in a hybrid RNA duplex compared with bromo and chloro analogues.
Acta Crystallogr.,Sect.D , 57, pp. 1609 - 1613, 2001.
Experimental Information:X-RAY DIFFRACTION
Space Group: 1
Cell Constants:
a = 53.730b = 19.390c = 45.830(Ångstroms)
= 90.00 = 105.70 = 90.00(degrees)
Refinement:The structure was refined using the SHELXL-97 program. The R value is 15.6 for 4339 reflections in the resolution range 11. to 1.6 Ångstroms with I > 4. sigma(I).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
RNA View
RNAML File
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1ID9

PubMed: 11679725




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