NDB ID: AR0002


Title:STRUCTURE OF A 16-MER RNA DUPLEX R(GCAGACUUAAAUCUGC)2 WITH WOBBLE LIKE A.C MISMATCHES
Molecular Description:5'-R(GpCpApGpApCpUpUpApApApUpCpUpGpC)-3'
Structural Features:A DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA, B: G C A G A C U U A A A U C U G C
Primary Citation:Pan, B., Mitra, S.N., Sundaralingam, M.
Structure of a 16-mer RNA duplex r(GCAGACUUAAAUCUGC)2 with wobble C.A+ mismatches.
J.Mol.Biol. , 283, pp. 977 - 984, 1998.
Experimental Information:X-RAY DIFFRACTION
Space Group: 3
Cell Constants:
a = 42.560b = 42.560c = 124.050(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, HANGING DROP
Drop:KCl, CaCl2, HEPES, PEG 400 ETHYLENE GLYCOL
Reservoir:PEG 400
Refinement:The structure was refined using the X-PLOR program. The R value is 17 for 2522 reflections in the resolution range 8.00 to 2.50 Ångstroms .

Biological Unit 1
Other Views
Asymmetric Unit
Crystal Packing
RNA View
RNAML File
Enlarge Biological Unit 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 405D

PubMed: 9799637




ndbadmin@ndbserver.rutgers.edu
©1995-2007 The Nucleic Acid Database Project
Rutgers, The State University of New Jersey