NDB ID: AR0004


Title:CRYSTAL STRUCTURE OF AN RNA R(CCCIUGGG) WITH THREE INDEPENDENT DUPLEXES INCORPORATING TANDEM I.U WOBBLES
Molecular Description:5'-R(CpCpCpIpUpGpGpG)-3'
Structural Features:A DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA, B, C, D, E, F: C C C I U G G G
Primary Citation:Pan, B., Mitra, S.N., Sun, L., Hart, D., Sundaralingam, M.
Crystal structure of an RNA octamer duplex r(CCCIUGGG)2 incorporating tandem I.U wobbles.
Nucleic Acids Res. , 26, pp. 5699 - 5706, 1998.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   1
Cell Constants:
a = 33.440b = 43.410c = 49.390(Ångstroms)
= 90.00 = 104.70 = 90.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, HANGING DROP
Drop:SODIUM CACODYLATE, MgCl2, SPERMINE, MPD
Reservoir:MPD
Refinement:The structure was refined using the X-PLOR 3.1 program. The R value is 18.5 for 3765 reflections in the resolution range 8.00 to 2.50 Ångstroms with Fobs > 2.00 sigma(Fobs).

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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)123

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 409D

PubMed: 9838002




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