NDB ID: AR0006
Title:
CRYSTAL STRUCTURE OF A 16-MER RNA DUPLEX WITH NON-ADJACENT A(ANTI).G(SYN) MISMATCHES
Molecular Description:
5'-R(GpCpApGpApGpUpUpApApApUpCpUpGpC)-3'
Structural Features:
A DOUBLE HELIX
Nucleic Acid Sequence:
Chain
s
A,B:
G C A G A G U U A A A U C U G C
Primary Citation:
Pan, B., Mitra, S.N., Sundaralingam, M.
Crystal structure of an RNA 16-mer duplex R(GCAGAGUUAAAUCUGC)2 with nonadjacent G(syn).A+(anti) mispairs.
Biochemistry
,
38
, pp. 2826 - 2831, 1999.
Experimental Information:
X-RAY DIFFRACTION
Space Group:
H
3
Cell Constants:
a = 42.530
b = 42.530
c = 128.060
(Ångstroms)
= 90.00
= 90.00
= 120.00
(degrees)
Refinement:
The structure was refined using the X-PLOR 3.1 program. The R value is 19.7 for 5433 reflections in the resolution range 8.000 to 1.900 Ångstroms with Fobs > 2.000 sigma(Fobs).
Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
RNA View
RNAML File
Enlarge Biological Assembly 1
Coordinate + Structure Data
Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))
Asymmetric Unit coordinates (cif format, Unix compressed(.gz))
Biological Assembly coordinates (pdb format)
XML |
Complete with coordinates (xml format, GNU compressed(.gz))
XML |
Coordinates only (xml format, GNU compressed(.gz))
XML |
Header only (xml format, GNU compressed(.gz))
Derivative Data
Nucleic Acid Backbone Torsions
Base Pair Parameters
Base Pair Step Parameters
Hydrogen Bonding Classification
Links
The RCSB Protein Data Bank:
420D
PubMed:
10052954
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