NDB ID: AR0009


Title:5'-R(*UP*AP*GP*CP*UP*CP*C)-3', 5'-R(*GP*GP*GP*GP*CP*UP*A)-3'
Structural Features:A DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA, C: U A G C U C C
ChainsB, D: G G G G C U A
Primary Citation:Mueller, U., Schubel, H., Sprinzl, M., Heinemann, U.
Crystal structure of acceptor stem of tRNA(Ala) from Escherichia coli shows unique G.U wobble base pair at 1.16 A resolution.
RNA , 5, pp. 670 - 677, 1999.
Experimental Information:X-RAY DIFFRACTION
Space Group: 1
Cell Constants:
a = 26.300b = 28.900c = 28.900(Ångstroms)
= 110.50 = 96.90 = 96.90(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, HANGING DROP
Drop:SPERMINE, SODIUM CACODYLATE, SrCl2, LiCl, MPD
Reservoir:MPD
Refinement:The structure was refined using the SHELXL-97 program. The R value is 12.3 for 23758 reflections in the resolution range 15.00 to 1.16 Ångstroms with Fobs > 0.0 sigma(Fobs).

Biological Unit 1
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Biological Units
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)12

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 434D

PubMed: 10334337




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