NDB ID: AR0019


Title:A SULFATE POCKET FORMED BY THREE GOU PAIRS IN THE STRUCTURE OF A NONAMERIC RNA
Molecular Description:5'-R(CpGpUpGpApUpCpGP)-D(C)-3'
Structural Features:A DOUBLE HELIX
Nucleic Acid Sequence:
Primary Citation:Masquida, B., Sauter, C., Westhof, E.
A sulfate pocket formed by three GoU pairs in the 0.97 A resolution X-ray structure of a nonameric RNA.
RNA , 5, pp. 1384 - 1395, 1999.
Experimental Information:X-RAY DIFFRACTION
Space Group: 3
Cell Constants:
a = 39.958b = 39.958c = 67.445(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, HANGING DROP
Drop:(NH4)2SO4, MgSO4, SODIUM CACODYLATE,, SPERMINE
Reservoir:(NH4)2SO4, MgSO4
Refinement:The structure was refined using the SHELXL-97 program. The R value is 14.87 for 23838 reflections in the resolution range 20.0 to 0.97 Ångstroms with I > 0.0 sigma(I).

Biological Unit 1
Other Views
Asymmetric Unit
Crystal Packing
RNA View
RNAML File
Enlarge Biological Unit 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 485D

PubMed: 10573129




ndbadmin@ndbserver.rutgers.edu
©1995-2007 The Nucleic Acid Database Project
Rutgers, The State University of New Jersey