NDB ID: AR0022


Title:STRUCTURE OF AN OCTAMER RNA WITH TANDEM GG/UU MISPAIRS
Molecular Description:5'-R(GpUpGpUpUpUpApC)-3'
5'-R(GpUpApGpGpCpApC)-3'
Structural Features:A DOUBLE HELIX
Nucleic Acid Sequence:
ChainA:G U G U U U A C
ChainB:G U A G G C A C
Primary Citation:Deng, J., Sundaralingam, M.
Synthesis and crystal structure of an octamer RNA r(guguuuac)/r(guaggcac) with G.G/U.U tandem wobble base pairs: comparison with other tandem G.U pairs.
Nucleic Acids Res. , 28, pp. 4376 - 4381, 2000.
Experimental Information:X-RAY DIFFRACTION
Space Group: 3
Cell Constants:
a = 41.920b = 41.920c = 56.410(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Refinement:The structure was refined using the X-PLOR 3.1 program. The R value is 19.8 for 2708 reflections in the resolution range 8.0 to 1.9 Ångstroms with Fobs > 2.0 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
RNA View
RNAML File
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 472D

PubMed: 11058138




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