NDB ID: AR0023


Title:CRYSTAL STRUCTURE OF THE RRE HIGH AFFINITY SITE
Molecular Description:5'-R(ApApCpGpGpGpCpGpCpApGpApA)-3'
5'-R(UpCpUpGpApCpGpGp UpApCpGpUpUpU)-3'
Structural Features:A DOUBLE HELIX, FLIPPED-OUT BASES, OVERHANGING BASES
Nucleic Acid Sequence:
ChainA:A A C G G G C G C A G A A
ChainB:U C U G A C G G U A C G U U U
Primary Citation:Ippolito, J.A., Steitz, T.A.
The structure of the HIV-1 RRE high affinity rev binding site at 1.6 A resolution.
J.Mol.Biol. , 295, pp. 711 - 717, 2000.
Experimental Information:X-RAY DIFFRACTION
Space Group: 1
Cell Constants:
a = 74.5b = 24.3c = 46.1(Ångstroms)
= 90. = 116.7 = 90.(degrees)
Refinement:The structure was refined using the CNS program. The R value is 21.1 for 9640 reflections in the resolution range 15.0 to 1.60 Ångstroms with Fobs > 0.0 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
RNA View
RNAML File
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1CSL

PubMed: 10656783

FR3D annotation of basepairs, stacking, motifs, and other interactions for: 1CSL




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