NDB ID: AR0034


Title:CRYSTAL STRUCTURE OF AN RNA DUPLEX WITH URIDINE BULGES
Molecular Description:5'-R(GpUpGpUpCpGp(CBR)pApC)-3'
Structural Features:A DOUBLE HELIX, BULGES
Nucleic Acid Sequence:
ChainsA,B,C,D:G U G U C G (CBR) A C
Primary Citation:Xiong, Y., Deng, J., Sudarsanakumar, C., Sundaralingam, M.
Crystal structure of an RNA duplex r(gugucgcac)(2) with uridine bulges.
J.Mol.Biol. , 313, pp. 573 - 582, 2001.
Experimental Information:X-RAY DIFFRACTION
Space Group: 41   2
Cell Constants:
a = 47.180b = 47.180c = 80.040(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the CNS 1.0 program. The R value is 21.2 for 33271 reflections in the resolution range 20. to 1.4 Ångstroms with Fobs > 2. sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
RNA View
RNAML File

Biological Assemblies
Enlarge Biological Assembly 1
Enlarge Biological Assembly 2



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)12

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1J9H

PubMed: 11676540




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