NDB ID: AR0040
Title:
CRYSTAL STRUCTURE ANALYSIS OF AN RNA HEPTAMER
Molecular Description:
5'-R(GpUpApUpApCpA)-3'
Structural Features:
SINGLE STRAND
Nucleic Acid Sequence:
Chain
s
A,B:
G U A U A C A
Primary Citation:
Shi, K., Pan, B., Sundaralingam, M.
The crystal structure of an alternating RNA heptamer r(GUAUACA) forming a six base-paired duplex with 3'-end adenine overhangs
Nucleic Acids Res.
,
31
, pp. 1392 - 1397, 2003.
Experimental Information:
X-RAY DIFFRACTION
Space Group:
C
2
2
2
Cell Constants:
a = 25.740
b = 106.580
c = 30.260
(Ångstroms)
= 90.00
= 90.00
= 90.00
(degrees)
Refinement:
The structure was refined using the CNS program. The R value is 18.0 for 2808 reflections in the resolution range 20.00 to 2.01 Ångstroms with Fobs > 2.0 sigma(Fobs).
Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
RNA View
RNAML File
Biological Assemblies
Enlarge Biological Assembly 1
Enlarge Biological Assembly 2
Coordinate + Structure Data
Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))
Asymmetric Unit coordinates (cif format, Unix compressed(.gz))
Biological Assembly coordinates (pdb format)
1
2
Structure Factors (cif format)
XML |
Complete with coordinates (xml format, GNU compressed(.gz))
XML |
Coordinates only (xml format, GNU compressed(.gz))
XML |
Header only (xml format, GNU compressed(.gz))
Derivative Data
Nucleic Acid Backbone Torsions
Base Pair Parameters
Base Pair Step Parameters
Hydrogen Bonding Classification
Links
The RCSB Protein Data Bank:
1L3Z
PubMed:
12595546
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