NDB ID: AR0041


Title:CRYSTAL STRUCTURE OF THE HIGHLY CONSERVED RNA INTERNAL LOOP OF SRP
Molecular Description:5'-R(GpCpGpUpCpApGpGpUpCp(CBV)CpG)-3'
Structural Features:A DOUBLE HELIX, internal loop, mispair
Nucleic Acid Sequence:
ChainA:G C G U C A G G U C (CBV) G
ChainB:C G G A A G C A G (CBV) G C
Primary Citation:Deng, J., Xiong, Y., Pan, B., Sundaralingam, M.
Structure of an RNA dodecamer containing a fragment from SRP domain IV of Escherichia coli.
Acta Crystallogr.,Sect.D , 59, pp. 1004 - 1011, 2003.
Experimental Information:X-RAY DIFFRACTION
Space Group: 43   2
Cell Constants:
a = 35.610b = 35.610c = 133.960(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the CNS 1.0 program. The R value is 20.0 for 17827 reflections in the resolution range 50. to 1.7 Ångstroms with Fobs > 2. sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
RNA View
RNAML File
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1LNT

PubMed: 12777762

FR3D annotation of basepairs, stacking, motifs, and other interactions for: 1LNT




ndbadmin@ndbserver.rutgers.edu
©1995-2013 The Nucleic Acid Database Project
Rutgers, The State University of New Jersey