NDB ID: AR0048


Title:CRYSTAL STRUCTURE OF THE RNA OCTAMER GGCGAGCC
Molecular Description:5'-R(GpGpCpGpApGpCpC)-3'
Structural Features:A DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA,B,C,D,E:G G C G A G C C
Primary Citation:Jang, S.B., Baeyens, K., Jeong, M.S., SantaLucia, J., Turner, D., Holbrook, S.R.
Structures of two RNA octamers containing tandem G.A base pairs.
Acta Crystallogr.,Sect.D , 60, pp. 829 - 835, 2004.
Experimental Information:X-RAY DIFFRACTION
Space Group: 64
Cell Constants:
a = 69.65b = 69.65c = 68.36(Ångstroms)
= 90. = 90. = 120.(degrees)
Refinement:The structure was refined using the CNS program. The R value is 24.1 for 3273 reflections in the resolution range 60.32 to 2.86 Ångstroms with Fobs > 2.5 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
RNA View
RNAML File

Biological Assemblies
Enlarge Biological Assembly 1
Enlarge Biological Assembly 2
Enlarge Biological Assembly 3



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)123

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1SA9

PubMed: 15103128




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