NDB ID: ARL062


Title:CRYSTAL STRUCTURE OF AN RNA DODECAMER CONTAINING THE ESCHERICHIA COLI SHINE-DALGARNO SEQUENCE
Molecular Description:5'-R(UpApApGpGpApGpGpUpGpApU)-3'
Structural Features:A DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA,C:U A A G G A G G U G A U
ChainsB,D:A U C A C C U C C U U A
Primary Citation:Schindelin, H., Zhang, M., Bald, R., Furste, J.P., Erdmann, V.A., Heinemann, U.
Crystal structure of an RNA dodecamer containing the Escherichia coli Shine-Dalgarno sequence.
J.Mol.Biol. , 249, pp. 595 - 603, 1995.
Experimental Information:X-RAY DIFFRACTION
Space Group: 1
Cell Constants:
a = 27.690b = 30.900c = 41.980(Ångstroms)
= 90.92 = 103.63 = 113.81(degrees)
Refinement:The structure was refined using the X-PLOR program. The R value is 19.5 for 2957 reflections in the resolution range 8.000 to 2.600 Ångstroms with Fobs > 0.000 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
RNA View
RNAML File

Biological Assemblies
Enlarge Biological Assembly 1
Enlarge Biological Assembly 2



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)12

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1SDR

PubMed: 7540215




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