NDB ID: BD0001


Title:5'-D(*AP*CP*CP*GP*AP*CP*GP*TP*CP*GP*GP*T)-3'
Structural Features:B DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA, B: (DA) (DC) (DC) (DG) (DA) (DC) (DG) (DT) (DC) (DG) (DG) (DT)
Primary Citation:Rozenberg, H., Rabinovich, D., Frolow, F., Hegde, R.S., Shakked, Z.
Structural code for DNA recognition revealed in crystal structures of papillomavirus E2-DNA targets.
Proc.Natl.Acad.Sci.USA , 95, pp. 15194 - 15199, 1998.
Experimental Information:X-RAY DIFFRACTION
Space Group: 3
Cell Constants:
a = 64.067b = 64.067c = 44.679(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, HANGING DROP
Drop:MgCl2, SPERMINE, Na Cacodylate, MPD
Reservoir:Na Cacodylate, MPD
Refinement:The structure was refined using the SHELXL-97 program. The R value is 17.3 for 8888 reflections in the resolution range 23.60 to 1.60 Ångstroms with I > 0.00 sigma(I).

Biological Unit 1
Other Views
Asymmetric Unit
Crystal Packing
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 423D

PubMed: 9860945




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