NDB ID: BD0011
Title:
DNA MINOR-GROOVE RECOGNITION OF A TRIS-BENZIMIDAZOLE DRUG BY A NON-SELF-COMPLEMENTARY AT-RICH SEQUENCE
Molecular Description:
5'-D(CpGp(CBR)pApTpApTpTpTpGpCpG)-3'
5'-D(CpGpCpApApApTpApTpGpCpG)-3'
Structural Features:
B DOUBLE HELIX
Nucleic Acid Sequence:
Chain
A:
Click here for sequence.
Chain
B:
Click here for sequence.
Primary Citation:
Aymami, J., Nunn, C.M., Neidle, S.
DNA minor groove recognition of a non-self-complementary AT-rich sequence by a tris-benzimidazole ligand.
Nucleic Acids Res.
,
27
, pp. 2691 - 2698, 1999.
Experimental Information:
X-RAY DIFFRACTION
Space Group:
P
2
1
2
1
2
1
Cell Constants:
a = 25.190
b = 40.580
c = 66.010
(Ångstroms)
= 90.00
= 90.00
= 90.00
(degrees)
Refinement:
The structure was refined using the SHELXL-97 program. The R value is 20.7 for reflections in the resolution range 8.0 to 2.3 Ångstroms with Fobs > 4.0 sigma(Fobs).
Biological Unit 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Unit 1
Coordinate + Structure Data
Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))
Asymmetric Unit coordinates (cif format, Unix compressed(.gz))
Biological Unit coordinates (pdb format)
Structure Factors (cif format)
XML |
Complete with coordinates (xml format, GNU compressed(.gz))
XML |
Coordinates only (xml format, GNU compressed(.gz))
XML |
Header only (xml format, GNU compressed(.gz))
Derivative Data
Nucleic Acid Backbone Torsions
Base Pair Parameters
Base Pair Step Parameters
Hydrogen Bonding Classification
Links
The Protein Data Bank:
458D
PubMed:
10373586
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©1995-2007 The Nucleic Acid Database Project
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