NDB ID: BD0013


Title:A "HYDRAT-ION SPINE" IN A B-DNA MINOR GROOVE
Molecular Description:5'-D(CpGpCpGpApAp(TAF)pTpCpGpCpG)-3'
Structural Features:B DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA, B: (DC) (DG) (DC) (DG) (DA) (DA) (TAF) (DT) (DC) (DG) (DC) (DG)
Primary Citation:Tereshko, V., Minasov, G., Egli, M.
A "Hydrat-Ion Spine" in a B-DNA minor groove
J.Am.Chem.Soc. , 121, pp. 3590 - 3595, 1999.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 25.070b = 39.720c = 65.770(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Crystallization Conditions:
Method:VAPOR DIFFUSION, SITTING DROP
Drop:RB CACODYLATE, MAGNESIUM ACETATE, SPERMINE
Reservoir:MPD
Refinement:The structure was refined using the SHELXL-97 program. The R value is 18.6 for 10813 reflections in the resolution range 20.0 to 1.5 Ångstroms with Fobs > 0.0 sigma(Fobs).

Biological Unit 1
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Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Unit coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The Protein Data Bank: 461D

PubMed: -1




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