NDB ID: BD0032


Title:A NEW CRYSTAL STRUCTURE FOR THE DODECAMER C-G-C-G-A-A-T-T-C-G-C-G: SYMMETRY EFFECTS ON SEQUENCE-DEPENDENT DNA STRUCTURE
Molecular Description:5'-D(CpGpCpGpApApTpTpCpGpCpG)-3'
Structural Features:B DOUBLE HELIX, FLIPPED-OUT BASES
Nucleic Acid Sequence:
ChainA:(DC) (DG) (DC) (DG) (DA) (DA) (DT) (DT) (DC) (DG) (DC) (DG)
Primary Citation:Johansson, E., Parkinson, G., Neidle, S.
A new crystal form for the dodecamer C-G-C-G-A-A-T-T-C-G-C-G: symmetry effects on sequence-dependent DNA structure.
J.Mol.Biol. , 300, pp. 551 - 561, 2000.
Experimental Information:X-RAY DIFFRACTION
Space Group: 32   2
Cell Constants:
a = 26.390b = 26.390c = 98.780(Ångstroms)
= 90.00 = 90.00 = 120.00(degrees)
Refinement:The structure was refined using the SHELXL-97 program. The R value is 23.8 for 2997 reflections in the resolution range 10. to 1.8 Ångstroms with I > 0. sigma(I).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1EHV

PubMed: 10884351




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