NDB ID: BD0037


Title:SOLVENT ORGANIZATION IN AN OLIGONUCLEOTIDE CRYSTAL: THE STRUCTURE OF D(GCGAATTCG)2 AT ATOMIC RESOLUTION
Molecular Description:5'-D(GpCpGpApApTpTpCpG)-3'
Structural Features:B DOUBLE HELIX, OVERHANGING BASES, BASE TRIPLET
Nucleic Acid Sequence:
ChainsA,B:(DG) (DC) (DG) (DA) (DA) (DT) (DT) (DC) (DG)
Primary Citation:Soler-Lopez, M., Malinina, L., Subirana, J.A.
Solvent organization in an oligonucleotide crystal. The structure of d(GCGAATTCG)2 at atomic resolution.
J.Biol.Chem. , 275, pp. 23034 - 23044, 2000.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 21.938b = 36.540c = 52.728(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the SHELXL-97 program. The R value is 13.5 for 29278 reflections in the resolution range 30. to 0.89 Ångstroms with I > 0.0 sigma(I).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1ENN

PubMed: 10749874




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