NDB ID: BD0039


Title:CRYSTAL STRUCTURE OF THE B-DNA HEXAMER GGCGCC WITH COBALT HEXAMINE
Molecular Description:5'-D(GpGpCpGpCpC)-3'
Structural Features:B DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA,B:(DG) (DG) (DC) (DG) (DC) (DC)
Primary Citation:Vargason, J.M., Eichman, B.F., Ho, P.S.
The extended and eccentric E-DNA structure induced by cytosine methylation or bromination.
Nat.Struct.Biol. , 7, pp. 758 - 761, 2000.
Experimental Information:X-RAY DIFFRACTION
Space Group: 41   2
Cell Constants:
a = 42.590b = 42.590c = 63.300(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the X-PLOR 3.851 program. The R value is 20.5 for 1937 reflections in the resolution range 8.0 to 2.6 Ångstroms with Fobs > 2.0 sigma(Fobs).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

Structure Factors (cif format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1F69

PubMed: 10966645




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