NDB ID: BD0054


Title:CRYSTAL STRUCTURE ANALYSIS OF THE B-DNA DODECAMER CGCGAATTCGCG WITH THALLIUM IONS.
Molecular Description:5'-D(CpGpCpGpApApTpTpCpGpCpG)-3'
Structural Features:B DOUBLE HELIX
Nucleic Acid Sequence:
ChainsA,B:(DC) (DG) (DC) (DG) (DA) (DA) (DT) (DT) (DC) (DG) (DC) (DG)
Primary Citation:Howerton, S.B., Sines, C.C., VanDerveer, D., Williams, L.D.
Locating monovalent cations in the grooves of B-DNA.
Biochemistry , 40, pp. 10023 - 10031, 2001.
Experimental Information:X-RAY DIFFRACTION
Space Group: 21   21   21
Cell Constants:
a = 25.944b = 40.744c = 66.202(Ångstroms)
= 90.00 = 90.00 = 90.00(degrees)
Refinement:The structure was refined using the SHELXL-97 program. The R value is 16.9 for 17667 reflections in the resolution range 10. to 1.2 Ångstroms with I > 2. sigma(I).

Biological Assembly 1
Other Views
Asymmetric Unit
Crystal Packing
Enlarge Biological Assembly 1



Coordinate + Structure Data

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format)

XML | Complete with coordinates (xml format, GNU compressed(.gz))
XML | Coordinates only (xml format, GNU compressed(.gz))
XML | Header only (xml format, GNU compressed(.gz))

Derivative Data

Nucleic Acid Backbone Torsions

Base Pair Parameters

Base Pair Step Parameters

Hydrogen Bonding Classification

Links

The RCSB Protein Data Bank: 1JGR

PubMed: 11513580




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